Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCCCCCCCCCCCHHHCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCSCCCCCCCSCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCCCCCCCSCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCHHHHCCSCCCCCCCCCCCCCCCCCCCSCCCCCCCCCSCCCCCCCSCCCCCCCCCCCCCSCCCCCCCCCCCCCSCCCCCCCCCSCCCCCCCCCCCCCCCCCSCCCCCCCHHHCCCSCCCCCCCCCCCCCSCCCCCCHHHHCCCCCCCCCCCCCCCCCSSCCCCCCCCSCCCSCCCCCCC MATEPKKAAAQNSPEDEGLLIVKIEEEEFIHGQDTCLQRSELLKQELCRQLFRQFCYQDSPGPREALSRLRELCCQWLKPEIHTKEQILELLVLEQFLTILPGDLQAWVHEHYPESGEEAVTILEDLERGTDEAVLQVQAHEHGQEIFQKKVSPPGPALNVKLQPVETKAHFDSSEPQLLWDCDNESENSRSMPKLEIFEKIESQRIISGRISGYISEASGESQDICKSAGRVKRQWEKESGESQRLSSAQDEGFGKILTHKNTVRGEIISHDGCERRLNLNSNEFTHQKSCKHGTCDQSFKWNSDFINHQIIYAGEKNHQYGKSFKSPKLAKHAAVFSGDKTHQCNECGKAFRHSSKLARHQRIHTGERCYECNECGKSFAESSDLTRHRRIHTGERPFGCKECGRAFNLNSHLIRHQRIHTREKPYECSECGKTFRVSSHLIRHFRIHTGEKPYECSECGRAFSQSSNLSQHQRIHMRENLLM |
1 | 5v3jE | 0.35 | 0.19 | 5.72 | 0.87 | CEthreader | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKANAQLSLHHRVHTDEKCFEKECGKAFMRPSHLLRHEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------ |
2 | 5yz0A | 0.06 | 0.04 | 1.86 | 0.83 | DEthreader | | ERAADNRAESGSNFAEWSAWAGYLITKVRHAYVLLGCNQEDQEVYAEIMAVLTTVFSMLDHLTQWARHKFEDYQSVTRF------LDLIPQDTLAAS-TRAVMHFESFITEKK--------------------------GVSAI--------------------SLGLLKLGGQLTVITQVNGVHANRSEWTDELNRVEAAWL-QWDL---V---E------NYLAADGKSTVRLQLDSLKLVRA-Q----------------------EYIVRLHMLCEHRLEMTQNSYLNRVARKAGHHQ----L-VERAKWLWSKGDVHQAL--GRAMLLVGRFMEETANSNAIMKKYKDVTAYDLMPMVTDNKMEKDYGTKAYEW--DLINVITFQLISRICFMIFPQQAMWMMTVIA--MIPTLPSSHEWNKRKDAESRELHI----------------------MRLMRDQREPLMLEQRLQGVIKTRN |
3 | 5v3jE | 0.38 | 0.19 | 5.62 | 4.21 | SPARKS-K | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFSQLSHHQKLHVGEKPYKQECGKAFPSNAQLSLHEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHECGKAFRYTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYE |
4 | 1vt4I3 | 0.06 | 0.06 | 2.59 | 1.61 | MapAlign | | --------------LHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIRMTLFRMVFLDFRFLEQKIRHDSWNASGSILNTLQQLKFYKPYICDNYERLVNAILDFIALMAEAIFEEAHKQVQRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
5 | 5v3mC | 0.38 | 0.19 | 5.56 | 1.85 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HKCKECGKAFHQLSHHQKLHVGEKPYKCECGKAFPSNAQLSLHHRCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCGKAFRYTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYE |
6 | 6eojA | 0.05 | 0.05 | 2.27 | 1.61 | MapAlign | | --TVVSHSLATHFTTSDYEELLVVRTNILSVYRPTRDGKLYLTDEFKFHGLITDIGLIPQKSPLSCLLLCAKISILKFNTLTNSIDTLSLHYYESTLRMDPGSSCALLFNNDIIAFLLVASELAKNIIDIQFLKNFTKPTIALLYQPKLVWAGNTTISKLPTQYVILTLNIQPAESATKIESTTIAFVKELPWDLHTIVPVSNGAIIVGTNELAFLDNTGVLQSTVLLNSLEIMFREKNTTSIWIPSSKNNDETLLLMDLKSNIYYIQMEAELLIKFDIFKLKENSNPKCITRLNKNMDLFIGFGSGNALVLRLNNLKSPFDIELLSSLRNVGPKIKGRDRYLITTKSRSDIYESDNNFDATTMFGEEKRIIQVTNHLYLYDTHFRRLTTI-KFDYEVIHVSVMYILVTVSVITSGLILKQL--LFTFVTADNQIIFTKIFQLNGVDQLPSIKQVMINKLEEYLTILGEIYQYRKLPQRRSRFYR |
7 | 5v3jE | 0.38 | 0.20 | 5.87 | 2.36 | MUSTER | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PHKCKECGKAFHHQKLHVGEKPYKCQECGKAFPSLSLHHRVHTDECFECKECGKAFMRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFDCDKVYSCSQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT------ |
8 | 7abhE1 | 0.05 | 0.05 | 2.33 | 1.58 | MapAlign | | --ATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFGVIRSLMAFRLTYIVVGSDSGRIVILEYQPSKNMFEKIHQETFVPGQFLAVDRAVMISAIEKQKLVYILLTISSPLEAHKANTLVYHVVGVDVGFENPMFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKITVPGGSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKFFFLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCLKTGFLFVASEYLYDTPQLYVACGRGPRSSLRVLRHGFNQVAFPLQYTPRKFVIHNLIIIETNEAAFSVAVCDWYVLVGVAKDLGGFVYTYTPVEEVPIAPFQGRVLIGGKLLRVYDLKLLRKCENKHIANYISGIQGHRVIVSDVQESFIWVRYKYPRWVTTASYDTVAGADKFGNICVVRLPPNTNDEVD |
9 | 2i13A | 0.53 | 0.16 | 4.71 | 1.44 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSRDHLAEHQRTH---KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH------- |
10 | 7abiE | 0.08 | 0.08 | 3.22 | 1.58 | MapAlign | | --FRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAVMISAIKQKLVYILNRDAAARLTISSPLEATLVYHVVPMFACLETFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFFFLAQTEQGDIFKITLETDEDMVTEIRLKEFSSAMPLEDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDTPQLYVACGRNPNAVWTVRRHIFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQYPDGIRHIRADKRVNEWKTPGKKTIVKCAVNQVVIALTGGELVYMLANVQRSRFLAVDNTVRIISLLQPLSMQALPAQPESLCIVEMFLYLNIGVLLRTVLRTGSRPVKLFRVRMQEAVLAMSSRSWLSYSYQSRFHLTP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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