>P49908 (381 residues) MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASGY LCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQ TDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTL KDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAP PGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRSG CCHCRHLIFEKTGSAITGQCKENLPSLCSGQGLRAEENITESCQGRLPPAAGQISQQLIP TEASASGRGKNQAKKGEGPSN |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASGYLCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQTDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTLKDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRSGCCHCRHLIFEKTGSAITGQCKENLPSLCSGQGLRAEENITESCQGRLPPAAGQISQQLIPTEASASGRGKNQAKKGEGPSN |
Prediction | CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCCSSSSSSCCCCCHHHHHHHHHHHHCCCCCCCSCCCCCCCCHHHHHCCCCCCSSSSSCCCCSSSSSCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHSCCCCCCSSSSCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC |
Confidence | 942588999999834788767888876678998543787625650881799996013689999999999999999998099855999984886236678999987501358620168665475887389988389991799568996187133116689999999962478988856677876545566555567778898888888897677777777666566889999888889997434566656788777888888778875555554310332213454203743247763100122133310367870221014678644542121232042033303698310012467788777877641114441468899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASGYLCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQTDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTLKDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRSGCCHCRHLIFEKTGSAITGQCKENLPSLCSGQGLRAEENITESCQGRLPPAAGQISQQLIPTEASASGRGKNQAKKGEGPSN |
Prediction | 623100000000001213434554553055044150554421352502000000021103102400430540243037540420100000044243413254036304730100324454430053062551100000100100120311100011420230031003453025043442745633553544446645646544544444543644345554247564264473544434543434351635645433744534445425434641354312341113136547331420010011001434433023305531142043521234740352043314334353555243464445344543354363488 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCSSSSSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCCSSSSSSCCCCCHHHHHHHHHHHHCCCCCCCSCCCCCCCCHHHHHCCCCCCSSSSSCCCCSSSSSCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHSCCCCCCSSSSCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASGYLCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQTDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTLKDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRSGCCHCRHLIFEKTGSAITGQCKENLPSLCSGQGLRAEENITESCQGRLPPAAGQISQQLIPTEASASGRGKNQAKKGEGPSN | |||||||||||||||||||
1 | 1n8jT | 0.08 | 0.04 | 1.46 | 0.46 | CEthreader | -------SLINTKIKPFKNQAFKNGEFIEVTEKDTE----------GRWSVFFFYPADFTVSPTELGDVADHYEELQK---LGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGA-LTRNFGLADRATFVVDPQGIIQAIEVTAEGIGDASDLLRKIKAAQYVAAHP--GEVCPAKWKEGEATLAPSLDLVGKI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
2 | 4bujB | 0.05 | 0.04 | 2.04 | 0.68 | EigenThreader | EAALPYIKNGISLIAYNIKDLGVHLPLTKREFSLDLATVYTYVDAPKD-------HNAALKLYDNILSGDFKMGKGIIFIERKN--------WKDAMTLLTQVHEQSSELSWSKAHMGYMDEALAGLDTVIKGI-------------KGMDLRSIDFRALNLWRQAKVYIMKHASAKQENVKCAFKLLIQSIKILDTFYKDHLRAFKCYFKAFDLDAGDYTAAKYITETYASKPNWQAASSIASRLIKGEKAKAELR---SNNWPFRVVGIAHLEKQ-EESDSIEWFQSALRVDPNDVESWVGLGQAYHACGRIEASIKVFDKAIQLR--PSHTFAQYFKAISLCDVGEYLESLDILEKVCQEAATEESFQIGLVEVLMRC | |||||||||||||
3 | 3lwaA | 0.11 | 0.04 | 1.61 | 0.52 | FFAS-3D | ------------FHSPDGKEIFYDEADRQQLPDIGGGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFTAASLGGVPASVIPTTIVLDKQHRPAAVFLREVTS---KDVLDVALPLVDE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 4btgA | 0.11 | 0.10 | 3.76 | 0.71 | SPARKS-K | NLKVKDLNGSARGLTQAFAIGELKNQLSQLPLQFTRTFSASMTSELGKGNIDPVMYARLFFQYAQAGSVDELVNQFTEYHQSN-----------------PEIWRKLTAYITGIKADAVPTAILEQLRTSEHELFHHITTDFVCHVLSAAYVYATYPALVDCVRASDLRRMLTALSSVDSKML---QATFKAKG-----ALAPALISQHLANAATTAFERSRGNFDANLWSPSTPKELDPSARLRNTNQRGRAEVIFSDEELSSTIWFIEAMSEPFKLRPINESYIGQTSAIDHMGQPSHVVVYEDWQFAK--EITAFTPVKLANNS-NQRFLDVEPGISDRMSATLAPIGNTFAVSANRTAVYEAVSQRGTVNSNGAEMT | |||||||||||||
5 | 4nmuA | 0.14 | 0.04 | 1.35 | 0.92 | CNFpred | ----------------------------------------------GKGVFLNFWGTWCKPCEKEMPYMNELYPKYKEK---GVEIIALDADE--TDIAVKNFVNQYGLKFPVAIDK---QKIIGTYGVPLPTSFLIDKDGKVVEQII---GEQTKEQLEGYLKKITP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 4bedB | 0.05 | 0.03 | 1.53 | 0.67 | DEthreader | ------------HAACCVHGMATFPQWHRLYT---GLPYWDWTLPRSELPELL-------------------------------TVS-T-I----------------------HDP-TGRDIPNPFGSKIENVHTKRI----V--WVGGKEPYGGHLHYASYDPLFYI-HSD--F-GAPYNLNDHTHDFSPDTFDYIYLEFIIHINRQEHDISSHHSL-VRHDLS-----TLSERDISLEQLVAVPYWDWTKPEHSALNQLLEIKDKQHHVRDHHED-HHSS-SMA---------------GHGVRKEINTLT-VLEDTAHG-RVNFFNFQYDNLRFGRVKPAHAGGDIMHVPLHPFYESV----------AKEM------ | |||||||||||||
7 | 6feuA | 0.09 | 0.05 | 1.81 | 0.79 | MapAlign | ----------------MSEGRIPLIGEKFPEMEVITTHGKIKLPDDGRWFVLFSHPGDFPVCTTEFYSFSKKYEEFKK--LNTELIGLSVDSNISHIEWVMWIEKKVEVPFPIIADPMGNVAMIHAESSTVRAVFIIDDKGTVRLILYYPMEIG--RNIDEILRAIR----------------------------------------------------------------------------------------------------------------ALQLVDKA-------------GVVTPANWPNNELIGDKVINPAPRTIKDAKMRLGQPFDWWFTYKEVK---------------------------------- | |||||||||||||
8 | 2atyA | 0.10 | 0.08 | 2.94 | 0.53 | MUSTER | ------------------------DISCGSPPPILNGRISYYSTAVGVIRYS---------CSGTFRLIGEKSLLCITKDKVDGT-----KPAPKCEYFNKYSSCPEPIVPGGYKIRGSTP----YRHG--DSVTF--ACKT----FSMNGNKSVW---------------CQANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVVVDISKDDPEVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKE----CRVNSAAFPAPIEKTISKTKGRPPQL-PPKEQMAKDKVSLTCMITFFPEDITVEQPAENYKNTQPIMNTNESYFVYS-QK | |||||||||||||
9 | 3lwaA | 0.12 | 0.05 | 1.66 | 0.68 | HHsearch | ----------------GGTFQSPDGADRQQLPDIGGDSLENLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGTPGGTVLGINVRDYRDIAQ-DFVT-DNGLDYPSIYD-PPF--TAASLGSVIPTTIVLDKQHRPAAVFLRE---VTSKDVLDVALPLVDE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 6p0wA | 0.09 | 0.05 | 1.79 | 0.41 | CEthreader | -----------------------MLRLGDIAPDFEQDSSEIRLHEWLGDSWGVLFSHPADFTPVCTTELGFTAKLKDQFAQRGVKVLALSVPVDSHLKWIDDINETQDTRVNFPIIADADRKVSELYDLTVRSLFIIDPNKKVRLIITYPASTRNFNEILRVIDSLQLTDEHKVATPANWEDGDEVVIVPSLKDEEEIKRRFPKGYRAVKPYLRLTPQPN----------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |