>P49902 (326 residues) MSTSWSDRLQNAADMPANMDKHALKKYRREAYHRVFVNRSLAMEKIKCFGFDMDYTLAKD GKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVD ARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYI GDHIFGDILKSKKRQGWRTFLVGSLFRSGSRQTLFASQVMRYADLYAASFINLLYYPFSY LFRAAHVLMPHESTVEHTHVDINEMESPLATRNRTSVDFKDTDYKRHQLTRSISEIKPPN LFPLAPQEITHCHDEDDDEEEEEEEE |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | MSTSWSDRLQNAADMPANMDKHALKKYRREAYHRVFVNRSLAMEKIKCFGFDMDYTLAKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVGSLFRSGSRQTLFASQVMRYADLYAASFINLLYYPFSYLFRAAHVLMPHESTVEHTHVDINEMESPLATRNRTSVDFKDTDYKRHQLTRSISEIKPPNLFPLAPQEITHCHDEDDDEEEEEEEE |
Prediction | CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHCCCSSSSSCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCSSSSCCCCCCCCCCCCCSSSSSCCCCCSCCCCCCCCCCCCCSSSCCCHHHHHHHHCCCCCSSSSSCCCHHHHHHHHHHHHCCSSSSHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCHHHHCCCC |
Confidence | 97405555313334677779999999999999998736730267898887388997325951799999999739589982897157778789872887777677789885652859997489975446898327996899954035455546788457357799999997899992899868423556544565197254214777630320078999999998888888888737764533687667985223344441257645641112455133320110112112221236887646789986421167777623301269 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | MSTSWSDRLQNAADMPANMDKHALKKYRREAYHRVFVNRSLAMEKIKCFGFDMDYTLAKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVGSLFRSGSRQTLFASQVMRYADLYAASFINLLYYPFSYLFRAAHVLMPHESTVEHTHVDINEMESPLATRNRTSVDFKDTDYKRHQLTRSISEIKPPNLFPLAPQEITHCHDEDDDEEEEEEEE |
Prediction | 74332042044266372503252015003400330134430344025204520530034164024004304734100000203141022002000223324544455540210000000004113113573330412476341422653450664300110105202510735353000001001000140446340200000420443452320341143224111530220141222210234432121312133343424335331234443444254364535424533553434434154454111223454476665778 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHCCCSSSSSCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCSSSSCCCCCCCCCCCCCSSSSSCCCCCSCCCCCCCCCCCCCSSSCCCHHHHHHHHCCCCCSSSSSCCCHHHHHHHHHHHHCCSSSSHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCHHHHCCCC MSTSWSDRLQNAADMPANMDKHALKKYRREAYHRVFVNRSLAMEKIKCFGFDMDYTLAKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVGSLFRSGSRQTLFASQVMRYADLYAASFINLLYYPFSYLFRAAHVLMPHESTVEHTHVDINEMESPLATRNRTSVDFKDTDYKRHQLTRSISEIKPPNLFPLAPQEITHCHDEDDDEEEEEEEE | |||||||||||||||||||
1 | 2j2cA | 0.72 | 0.53 | 15.06 | 1.00 | DEthreader | ERLV--Y-VFDTLYGNQYIQDTERYIRFQDRDAVDWVHYKG--SLKEKTVENLEKYVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPELEFRGSQTLFASQVMRYADLYAASFINLLYYPFYLFRAA---------------------------------------------------------------------------------- | |||||||||||||
2 | 2j2cA1 | 0.95 | 0.73 | 20.56 | 2.77 | SPARKS-K | --TSWSDRLQNAADMPANMDKHALKKYRREAYHRVFVNRSLAMEKIEKTVENLEKYVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVGSLFRSGSRQTLFASQVMRYADLYAASFINLLYYPFSYLFRAAHVLMPHES------------------------------------------------------------------------- | |||||||||||||
3 | 2j2cA | 0.82 | 0.62 | 17.58 | 1.13 | MapAlign | LLACLVDFFTNFKDGDLFMSYRSMFQDVRDAVDWVHYKGSL----KEKTVENLEKYVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVISLFRSGSRQTLFASQVMRYADLYAASFINLLYYPFSYLFRAAHVLMPHES------------------------------------------------------------------------- | |||||||||||||
4 | 2j2cA | 0.81 | 0.62 | 17.49 | 1.02 | CEthreader | NCPRYTSCETGFKDGDLFMSYRSMFQDVRDAVDWVHYKGSLKEKTVE----NLEKYVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVGSLFRSGSRQTLFASQVMRYADLYAASFINLLYYPFSYLFRAAHVLMPHES------------------------------------------------------------------------- | |||||||||||||
5 | 2j2cA1 | 0.93 | 0.71 | 20.07 | 1.66 | MUSTER | --TSWSDRLQNAADMPANMDKHALKKYRREAYHRVFVNRSMEKSLKEKTVENLEKYVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVGSLFRSGSRQTLFASQVMRYADLYAASFINLLYYPFSYLFRAAHVLMPHES------------------------------------------------------------------------- | |||||||||||||
6 | 2j2cA | 0.81 | 0.61 | 17.33 | 4.72 | HHsearch | LNTLFACLVDFNCPGDLFMSYRSMFQDVRDAVDWVHYKGSLK----EKTVENLEKYVVKDGKLPLLLSRMKEG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVGSLFRSGSRQTLFASQVMRYADLYAASFINLLYYPFSYLFRAAHVLMPHES------------------------------------------------------------------------- | |||||||||||||
7 | 2j2cA1 | 0.93 | 0.71 | 20.07 | 2.37 | FFAS-3D | --TSWSDRLQNAADMPANMDKHALKKYRREAYHRVFVNRSLAMELKEKTVENLEKYVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIPELRSGSRQTLFASQVMRYADLYAASFINLLYYPFSYLFRAAHVLMPHES------------------------------------------------------------------------- | |||||||||||||
8 | 2j2cA | 0.59 | 0.43 | 12.41 | 1.05 | EigenThreader | DDTERACLVDFFTNCPRYTETRSMFQDVRDAVDWVHYKGSLKEKTVE----NLEKYVVKDGKLPLLLSRMKEVG-KVFLATNSDKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLF--FGEGTVQVDTKTG-----KLKIGTYGIVYSGGS-SDTICDLLGAKGKDILYIGDHIFGDIKSKKRQGWRTFLVIPEMCYGMMGSLLFASQVMRYADLYAASFINLLYYPFSYLFRAAHVLMPHES------------------------------------------------------------------------- | |||||||||||||
9 | 2xjeA | 0.87 | 0.62 | 17.36 | 2.87 | CNFpred | ------------------MSYRSMFQDVRDAVDWVHYKGSLKEKTV----ENLEKYVVKDGKLPLLLSRMKEVGKVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFGEGTVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVGSLFRSGSRQTLFASQVMRYADLYAASFINLLYYPFSYLFRAAHVLMPHES------------------------------------------------------------------------- | |||||||||||||
10 | 2bdeA | 0.25 | 0.18 | 5.51 | 1.00 | DEthreader | ERLASFY-IDSKNGN-IDPNYAQAAQDVQYCVDKVH--SD--GTLKNIIIKNLKKYVIREKEVVEGLKHFIRYKKIFILTNSEYSYSKLLLDYALSP-FLDK---G-EHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGT-T-N-VHGPIVP-GVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVEELEVFREESYFAYQVDRFACIY-EKLSDLLEHSTYFRANRR--------------------------------------------------------------------------------- | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |