>P49821 (271 residues) MLATRRLLGWSLPARVSVRFSGDTTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRG DWYKTKEILLKGPDWILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEG EPGTCKDREILRHDPHKLLEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAG LIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPT TVANVETVAVSPTICRRGGTWFAGFGRERNS |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | MLATRRLLGWSLPARVSVRFSGDTTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNS |
Prediction | CSSSSSSSCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCSSSSSCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCSSSSSSCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCSSSSSCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC |
Confidence | 9455565278323456416788621344315898776758996256898988677786289999999997699999999999599877757583336787535567999608999577899765227999984989999999999999799969999768739999999999999998187665546789985189998798665867999999997486889999999852241599851124789985799999858999750898899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | MLATRRLLGWSLPARVSVRFSGDTTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNS |
Prediction | 6125431264412240316364644425436243246130000232252414064026551062034017341630152047030111010010002003103555844130000001203212220120025203300300200020040520000025423400520450053047342236312434452402023142312021032003102734142543231101100131200000010001023005301510352335628 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CSSSSSSSCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCCCCCCHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCSSSSSCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCSSSSSSCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCSSSSSCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC MLATRRLLGWSLPARVSVRFSGDTTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNS | |||||||||||||||||||
1 | 6vw7B | 0.40 | 0.35 | 10.45 | 1.33 | DEthreader | ------------------TEEPFLKQ-------------QERFARVGITDPSLDDYRAHEGFAGLERALAMQPAEIVQEVTDSGLRGRGGAAFPTGIKWKTVLGA-QSAVKYIVCNADEGDSGTFSDRMVMEDDPFMLIEGMTIAALAVGAEQGYIYCRSEYPHAIAVLESAIGIANAAGWLGDDIRGSGKRFHLEVRKGAGAYVCGEETALLESLEGRRGVVRAKPPLPALQGLFGKPTVINNVISLATVPVILARGAQYYRDYGMGRSR | |||||||||||||
2 | 6hl2B2 | 0.44 | 0.40 | 11.66 | 3.40 | SPARKS-K | -------------------------SYPAIPRIYAETTLNMLLKRAKKPRVSIDEYLKDGGYQALEKALNMSPEEIIDWVDKSTLRGRGGAGFPTGKKWKFAVQN--PGPRYFICNADESEPGTFKDRIIIERDPHLLIEGIIISSYAIGANEAYIYIRGEYPAGYYILRDAIEEAKKKGFLGKNILGSGFDLEIYVARGAGAYICGEETALIESLEGKRGHPRLKPPYPVQKGLWGKPTVVNNVETIANVPFIISMGWEEYRYIGPSDYA | |||||||||||||
3 | 6vw7B | 0.36 | 0.36 | 10.76 | 1.71 | MapAlign | TIFVPRLALGADRIVRNGSRGMWLEPLVEVTGAGRVAYGPVSLARVGITDPLLDDYRAHEGFAGLERALAMQPAEIVQEVTDSGLRGRGGAAFPTGIKWKTVLGA-QSAVKYIVCNADEGDSGTFSDRMVMEDDPFMLIEGMTIAALAVGAEQGYIYCRSEYPHAIAVLESAIGIANAAGWLGDDIRGSGKRFHLEVRKGAGAYVCGEETALLESLEGRRGVVRAKPPLPALQGLFGKPTVINNVISLATVPVILARGAQYYRDYGMGRSR | |||||||||||||
4 | 6vw7B | 0.37 | 0.37 | 10.96 | 1.11 | CEthreader | GPVSAADVPGLFDAGLLQGGEHALSQGVTEEIPFLKQQERLTFARVGITDPLLDDYRAHEGFAGLERALAMQPAEIVQEVTDSGLRGRGGAAFPTGIKWKTVLGA-QSAVKYIVCNADEGDSGTFSDRMVMEDDPFMLIEGMTIAALAVGAEQGYIYCRSEYPHAIAVLESAIGIANAAGWLGDDIRGSGKRFHLEVRKGAGAYVCGEETALLESLEGRRGVVRAKPPLPALQGLFGKPTVINNVISLATVPVILARGAQYYRDYGMGRSR | |||||||||||||
5 | 5lnk1 | 0.97 | 0.88 | 24.62 | 2.56 | MUSTER | --------------------------PKKTSFGSLKDEDRIFTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFGRERNS | |||||||||||||
6 | 6y79B | 0.74 | 0.66 | 18.83 | 3.27 | HHsearch | ---------------------------RQYGG--LKDQDRIFQNLYDNYGWDLASARKQGDWYKTKELILKGDTWIIDEIKKSGLRGRGGAGFPSGLKWSFMNPPGNEGPRYLVVNADEGEPGTCKDREIMRKDPHKLVEGCLLAGRAMNATAAYIYIRGEFYNEAAVLQTAINEAYAAGLIGKDACGSGYDFDVYIHRGMGAYVCGEETSLIESLEGKAGKPRLKPPFPAGVGLFGRPSTVTNVETVAVAPTILRRGGDWFASFGRERNS | |||||||||||||
7 | 6hl2B2 | 0.44 | 0.40 | 11.66 | 2.74 | FFAS-3D | -------------------------SYPAIPRIYAETTLNMLLKRAKKPRVSIDEYLKDGGYQALEKALNMSPEEIIDWVDKSTLRGRGGAGFPTGKKWKFAVQN--PGPRYFICNADESEPGTFKDRIIIERDPHLLIEGIIISSYAIGANEAYIYIRGEYPAGYYILRDAIEEAKKKGFLGKNILGSGFDLEIYVARGAGAYICGEETALIESLEGKRGHPRLKPPYPVQKGLWGKPTVVNNVETIANVPFIISMGWEEYRYIGPSDY- | |||||||||||||
8 | 6vw7B | 0.34 | 0.33 | 9.94 | 1.55 | EigenThreader | ITTIFVPRDRNEHVVRNGSRVAYGPVSG--LLQGGEHALSQGVTEGITDPLSLDDYRAHEGFAGLERALAMQPAEIVQEVTDSGLRGRGGAAFPTGIKWKTVLGAQSAVKY-IVCNADEGDSGTFSDRMVMEDDPFMLIEGMTIAALAVGAEQGYIYCRSEYPHAIAVLESAIGIANAAGWLGDDIRGSGKRFHLEVRKGAGAYVCGEETALLESLEGRRGVVRAKPPLPALQGLFGKPTVINNVISLATVPVILARGAQYYRD-----YG | |||||||||||||
9 | 6g72F | 0.98 | 0.87 | 24.41 | 2.58 | CNFpred | -----------------------------TSFGSLKDEDRIFTNLYGRHDWRLKGALRRGDWYKTKEILLKGPDWILGEMKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSDYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNS | |||||||||||||
10 | 5lnk1 | 0.93 | 0.83 | 23.21 | 1.33 | DEthreader | ----KKTS--F--LKDEDRI---------------------FTNLYGRHDWRLKGAQSRGDWYKTKEILLKGPDWILGEVKTSGLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIIRHDPHKLVEGCLVGGRAMGARAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGAGAYICGEETALIESIEGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGAWFASFGRERNS | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |