>P49755 (130 residues) MSGLSGPPARRGPFPLALLLLFLLGPRLVLAISFHLPINSRKCLREEIHKDLLVTGAYEI SDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQ LVILDMKHGV |
Sequence |
20 40 60 80 100 120 | | | | | | MSGLSGPPARRGPFPLALLLLFLLGPRLVLAISFHLPINSRKCLREEIHKDLLVTGAYEISDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV |
Prediction | CCCCCCCCCHHHHHHHHHHHHHHHHHHHCSSSSSSSCCCCCSSSSSSCCCCCSSSSSSSSSSCCCCCCCCSSSSSSSCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCCCCCCCSSSSSSSSSCC |
Confidence | 9987798552479999999999998764058999988997299976656994999999999736899970489999859997899850554665999917992189999848999875199999998279 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MSGLSGPPARRGPFPLALLLLFLLGPRLVLAISFHLPINSRKCLREEIHKDLLVTGAYEISDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV |
Prediction | 7644444333432220222223101133031030304664441035305662302030302244574442302020424744402456636524120305454403030315434544413020305346 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCHHHHHHHHHHHHHHHHHHHCSSSSSSSCCCCCSSSSSSCCCCCSSSSSSSSSSCCCCCCCCSSSSSSSCCCCCSSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCCCCCCCSSSSSSSSSCC MSGLSGPPARRGPFPLALLLLFLLGPRLVLAISFHLPINSRKCLREEIHKDLLVTGAYEISDQSGGAGGLRSHLKITDSAGHILYSKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGV | |||||||||||||||||||
1 | 5gu5A | 0.15 | 0.12 | 3.87 | 1.17 | DEthreader | -------------------------GSD-SDFTFTLPAGRKECFYQPMPLKASLEIEYQVLD--G-G-ELDIDFHLTSPEGRTLVFEQRKSDGVHTIET-EDGDYMFCFDNTFSTIS-EKVIFFELILDN | |||||||||||||
2 | 5azxA | 0.94 | 0.72 | 20.29 | 1.81 | SPARKS-K | -----------------------------GSISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHG- | |||||||||||||
3 | 1olmE | 0.13 | 0.11 | 3.75 | 0.82 | MapAlign | -------------CELLLQECAHQTTKLQYEHSVQISRGSSHQVEYEILPGCVLRWQFMSD-------GADVGFGIFLKKMTEVLNQRYSHPEDGTLTCSDPGIYVLRFDNTYSF-IHAKKVNFTVEVLL | |||||||||||||
4 | 5gu5A | 0.14 | 0.11 | 3.66 | 0.70 | CEthreader | --------------------------GSDSDFTFTLPAGRKECFYQPMPLKASLEIEYQVLDGGE----LDIDFHLTSPEGRTLVFEQRKSDGVHTIET-EDGDYMFCFDNTFSTI-SEKVIFFELILDN | |||||||||||||
5 | 5azxA | 0.94 | 0.72 | 20.29 | 1.88 | MUSTER | -----------------------------GSISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHG- | |||||||||||||
6 | 5azxA | 0.94 | 0.72 | 20.29 | 2.95 | HHsearch | -----------------------------GSISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHG- | |||||||||||||
7 | 5azxA | 0.94 | 0.72 | 20.29 | 1.63 | FFAS-3D | -----------------------------GSISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHG- | |||||||||||||
8 | 6iljA | 0.07 | 0.07 | 2.87 | 0.67 | EigenThreader | ALTAAETGHTSQVNFHVRSESSVENFLSRSIVEYKTRPDKMYDSWVINTRQVEVTFVITSVQDDSTRQNLTHQIMYVPPGGPISVFWTEGNPPRMSIPSNFYNMGKLYFRHVNDKTISPITSKVRIYFKP | |||||||||||||
9 | 5azxA | 0.94 | 0.72 | 20.29 | 1.56 | CNFpred | -----------------------------GSISFHLPVNSRKCLREEIHKDLLVTGAYEITDQSGGAGGLRTHLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHG- | |||||||||||||
10 | 3jqwA | 0.06 | 0.05 | 2.05 | 1.17 | DEthreader | ----T---K-EPNAS--GP--I---VPGI-PVSGTIENTDQDYFYFDVITPGEVKIDINKLG---Y---GGATWVVYDENNNAVSYATDDQNLSGKFKADKPGRYYIHLYMFN---GSYMPYRINIEGSV | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |