Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460
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| SS Seq | CCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCSCCCCCCCSSCCCCCCHHHCCCCCCCCCSSCCCCCCSCCCCCCCCCCCCCCCCCCCSCCCCCCCSCCCCCCHHHHCCCCCCCCCCCCCCCCCSSCCCCCCCCSCCCCCCCCCCSCCCCCCCSCCCCCCCCCSCCCCCCCCCCCCCCCCCSSCCCCCCHHHHCCCCCCCCSCCCCCCCSCCCCCCHHCHCCCCSSCCCCCCSCCCCCCSCCCCCCHCHSCCCCCCCCCCCCCCCCCCCSCCCCCCHHHHCCCCCCCCCCSCCCCCCSCCCCCCHHHHCCCCCCCCCSCCCCCCCSCCCCCCCCCSCCSSCCCCCCCCCCCCCCCCCSSCCCCCHHHHCCCCCCCCCSCCCCCCCSSCCCCCCCHHHCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKRKMRSKKEDSSDSENAEPDLDDNEDEEEPAVEIEPEPEPQPVTPAPPPAKKRRGRPPG |
1 | 5v3jE | 0.33 | 0.19 | 5.85 | 1.18 | CEthreader | | ------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHR-VHTDEKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHT--GEKPHKCKECGKGFISDSHLLRHQSVHT--GETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSG----EKPYECKECGKTFGRGSELSRHQKIHT------------------------------------------------------------------------------- |
2 | 5v3jE | 0.27 | 0.16 | 4.93 | 1.23 | EigenThreader | | -----PHKCKECGKAFH-------------------TPSQLSHHQKLHVGE----------------------KPYKCQECGKAFSNAQLSLHHRVHTDEKCFECK-ECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLT-HAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSG------------------------------------------------------------DKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSG----EKPYECKECGKTFGRGSELSRHQKIHT------------------------------------------------------------------------------- |
3 | 5v3jE | 0.33 | 0.20 | 5.91 | 2.67 | FFAS-3D | | --------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRI-HTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGET--PYKCKECGKGFRRGSELARHQRAHSG--DKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT--------------------------------------------------------------------------------------------------------------- |
4 | 5v3jE | 0.32 | 0.19 | 5.80 | 6.72 | SPARKS-K | | --------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRIHTG-EKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGE--TPYKCKECGKGFRRGSELARHQRAHSG--DKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT--------------------------------------------------------------------------------------------------------------- |
5 | 5v3mC | 0.32 | 0.19 | 5.74 | 8.77 | CNFpred | | ------------------------------------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTD-EKCFECKECGKAFMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTG--EKPHKCKECGKGFISDSHLLRHQSVHT--GETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHS----GEKPYECKECGKTFGRGSELSRHQKIHT------------------------------------------------------------------------------- |
6 | 6mu1A | 0.06 | 0.04 | 1.82 | 0.67 | DEthreader | | DKEEPVM-ENILILRHSQQDYRK--------LHNNRKLL----------------CVSMNKPTQI-VLSYYRYQLNARDRQYLNEPLRASFCRLMLHMHVDDPE-IDDYDSSGAFAMAIYFGFYNFSDLLRTKLDCFGGRTF---LR-VLLHLT-M-HDYPPL-----VSGALQL---------------SIVEKS----------KQQQRLLR---------------------LQDIVSALEDRL-------RPLVQAELSVLVVEMTKDMSLVQCLDKEGASVESILLAIALLIQFRLKKSEKF----FKV--F-YDRMKVAQQEIKATVTVNTLLGLINEKNVALINLDINPLGKKRMDLVL-------ELKNNASKLLLAIMESRHDSENRI-----------T-YTGPESYVAEMIRERN----------------------------------------- |
7 | 5v3jE | 0.32 | 0.19 | 5.62 | 1.66 | MapAlign | | --------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQ-RIHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVH--------------------------------TGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSH----SGEKPYECKECGKTFGRGSELSRHQKIH-------------------------------------------------------------------------------- |
8 | 5v3jE | 0.33 | 0.19 | 5.85 | 3.32 | MUSTER | | --------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQRI-HTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSV--HTGETPYKCKECGKGFRRGSELARHQRAHSG--DKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT--------------------------------------------------------------------------------------------------------------- |
9 | 5v3jE | 0.32 | 0.19 | 5.68 | 2.69 | HHsearch | | --------------------------------------------------------------------------PHKCKECGKAFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHLLRHQR-IHTGEKPHKCKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSV------------------------------HTG--ETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHSGE----KPYECKECGKTFGRGSELSRHQKIHT------------------------------------------------------------------------------- |
10 | 5v3gD | 0.39 | 0.14 | 4.18 | 0.69 | CEthreader | | ---------------------------------------------------------------------PGSEKPYVCRECGRGFSNKSHLLRHQRTHTGEKPYVCRECGRGFRDKSHLLSHQRTHTGEKPYVCRECGRGFRDKSNLLSHQR-THTGEKPYVCRECGRGFSWQSVLLRHQRTHTGEKPYVCRECGRGFRDKSNLLSHQRTHTGEKPYVCRECGRGFRNKSHLLRHQRTHT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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