>P49711 (190 residues) MEGDAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQM VMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ GELPPQEDPS |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MEGDAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQMVMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQGELPPQEDPS |
Prediction | CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCSCCCCCCCCCHHHHHHHCCCSSSSHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCCSSSSSCCCCCSCCCSSCCHHHHHHHHHHHHHCCCCCCCCCSSSSCCCCCCCCSSSSSCCCCCSSSSCCCCCCCCCCCC |
Confidence | 9973378999867777653455689988731201124122443365305677651451242212129689998999986126765545667633899997323203578762578841454202220021899887775343103434588536741468886169996278725642101479776899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 | | | | | | | | | MEGDAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQMVMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQGELPPQEDPS |
Prediction | 8656425411553542144553542544464355463141355545235225414440321114403331241324215433446444424433102030241454324234032142324342323333154044324442456325534210023031352141141236242541557715467678 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
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SS Seq | CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCSCCCCCCCCCHHHHHHHCCCSSSSHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCCSSSSSCCCCCSCCCSSCCHHHHHHHHHHHHHCCCCCCCCCSSSSCCCCCCCCSSSSSCCCCCSSSSCCCCCCCCCCCC MEGDAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQMVMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPVPVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQGELPPQEDPS | |||||||||||||||||||
1 | 6s9sA | 0.05 | 0.04 | 2.02 | 0.52 | CEthreader | QTDYRIFELNKRLQNWTEECDNLWWDAFTTEFFEDDAMLTITFCLEDGPKRYTIGRTLIPRYFRSIFEGGATELYYVLKHPKESFHNNFVSLDCDQCTMVTQHGKPMFTQVCVEGRLYLEFMF-------------------DDMMRIKTWHFSIRQHRELIPRSILAMHAQDPQMLDQLSKNITRC--- | |||||||||||||
2 | 6ojrA2 | 0.08 | 0.06 | 2.51 | 0.57 | EigenThreader | NFDGKLQSQT------FCAHPKIDP------VTGNLCAF-AYGAKTLDMAYIEITGKLKEIPFQNPYYDRLEQLGILPRNGDARDFVGHVMTKVHIDMPVSRNNSDPVAGQGFLTRWTVDM-----------------------ASNGDSFEKTERLFDR--PDEFPRIDAYRHGWMLILDTEKPYEAPY | |||||||||||||
3 | 4qdgA1 | 0.08 | 0.05 | 1.85 | 0.32 | FFAS-3D | -------------------------------------------------------DCLTLLVYDENGNYVDTRIVTGTELQDENYRKLDLKQGNYHFVAYGGLACNKSSF----------LKYTPGEGTGYTDLQVELDSECLTNPRRKNLHGLYW------GELTLATADLYSEGTVE----------- | |||||||||||||
4 | 6b12B | 0.09 | 0.06 | 2.44 | 0.55 | SPARKS-K | ---ISDFERIREDGKVIDENTVD----QIALGWSPCRVVEARWRWQEQLLSVVNSRGLLAIVV------------------PDRQ-----------HLAILWNDDDTGVAATLYVVSG-----DRQQQIRIADEAGIYS-WFEQFPQVSPSIFTCFSRQRDQAFRVDIDASTGDIVSIQHSR-------- | |||||||||||||
5 | 4jwtA | 0.12 | 0.04 | 1.48 | 0.67 | CNFpred | ----------------------------------------------GNKYYEATYQGVELVIAYS-KVFSALSAATMIEHF---------GATKLLFSGVAGAISTNLKVGDLIVATKLSQ--------------------------------------------------------------------- | |||||||||||||
6 | 4plpA | 0.08 | 0.06 | 2.53 | 0.83 | DEthreader | YRELL-TSSL----------D--IMELARENG-ALYIDVEPWLFYF-RSNLRTVLARAVSCC-----GANPGMVSWVKL-EPTTEEWRLAMDGVGIHIAERDTQRAKVNTWFGA-LGWGT------C-ANESISIADLTVRDAAGQAVYRPTCHYAYHPCNGIDELGVLLHKAYWYGSQLSITQNG---- | |||||||||||||
7 | 6lz1A2 | 0.07 | 0.07 | 2.78 | 0.79 | MapAlign | -----LVFGIGDGGGGPTEKLRRCKGIANTVGYLPNVDDNFILVNDHLRVTIAPNGLILSLFDLHLDKGKVSIKESGPLRASVVVDIPISELSHMKATISLEGYNDCSEFTGVNFTCEVDWEFASYETQFGITKRPTRSPKQPDAHADMGKHTIRYAVYPNVILSHIKMAKGKSIILRVYESL------- | |||||||||||||
8 | 6h9cD | 0.12 | 0.10 | 3.51 | 0.44 | MUSTER | IGNLSAEKQISDGQPFISEQD------------------VAAGDPNTPALTIEGPDG-YVIAVDAGTPIAPEFRDS--NG-------EKLDPSTRVIVQKCDRQGNP--LGDGIIFNDTL------GRFNYNKMRTDYMRKTAKSLMVDEREIVKVFVDVPDGANGYTLGDDGKVEIVDHDDLTEGETQA | |||||||||||||
9 | 2zb6A2 | 0.17 | 0.06 | 1.89 | 0.58 | HHsearch | -----------------------------------------------------------------------------------------------------DLSNCMVALGELKLAALCHGEDSI-------------------TIPYQG-------SGKGVSFQLVKLGVWKSPTDMQSWVPLSTDDPV | |||||||||||||
10 | 1cf3A | 0.06 | 0.06 | 2.71 | 0.51 | CEthreader | PHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGKPRAVGVEFGTHKGNTHNVYAKHGIGMKSILEPLGIDTVVDLPVGLNLQDQTTATVRSRITSAGAGQGQAAWFATWAEEAVARGGFHNTTALLIQYENYRDWIVNHNVAYSELFLDTAGVASFDVWDLLGYVHILDKDPYLHHFAYD | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |