>P49427 (236 residues) MARPLVPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKA RLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNV RTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVDAERDG VKVPTTLAEYCVKTKAPAPDEGSDLFYDDYYEDGEVEEEADSCFGDDEDDSGTEES |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MARPLVPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVDAERDGVKVPTTLAEYCVKTKAPAPDEGSDLFYDDYYEDGEVEEEADSCFGDDEDDSGTEES |
Prediction | CCCCCHHHHHHHHHHHHHHHHHCCCCCSSSSSCCCCCCCSSSSSSSCCCCCCCCCCSSSSSSSCCCCCCCCCCSSSSCCCCCCCCSCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCSHHHHHHHHHHHHHCCCCCCCHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 99874399999999999999969999869985797762189999988999987894899999869999999986887488757881999968500106987665556766679887571999999999996199999831189999998688999999999999999876314331113787885167764314689876543111113323454212222224676443578899 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | MARPLVPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVDAERDGVKVPTTLAEYCVKTKAPAPDEGSDLFYDDYYEDGEVEEEADSCFGDDEDDSGTEES |
Prediction | 85654453034103521550474325403030345610230401040274020240202030402760134103030314100000166140001003444544443545445131023021002001100631326321134005103725623640450152035314535541467645245415523466556466565434444335454444465544545555656778 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCHHHHHHHHHHHHHHHHHCCCCCSSSSSCCCCCCCSSSSSSSCCCCCCCCCCSSSSSSSCCCCCCCCCCSSSSCCCCCCCCSCCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCSHHHHHHHHHHHHHCCCCCCCHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MARPLVPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVDAERDGVKVPTTLAEYCVKTKAPAPDEGSDLFYDDYYEDGEVEEEADSCFGDDEDDSGTEES | |||||||||||||||||||
1 | 5knlC | 0.45 | 0.33 | 9.53 | 1.17 | DEthreader | --MP-SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFREN------PQEFKKRVRRLVRRSIEMILE-H-H------------------------------------------------------ | |||||||||||||
2 | 6op8A | 0.43 | 0.31 | 8.94 | 2.60 | SPARKS-K | ------AMALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDR------EEYCRVVRRLARKTLGLLVPR--------------------------------------------------------- | |||||||||||||
3 | 5knlC | 0.46 | 0.32 | 9.39 | 1.03 | MapAlign | -----SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRE------NPQEFKKRVRRLVRRSIEMI------------------------------------------------------------ | |||||||||||||
4 | 5knlC | 0.44 | 0.32 | 9.42 | 0.70 | CEthreader | ---MPSSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFREN------PQEFKKRVRRLVRRSIEMILEHH-------------------------------------------------------- | |||||||||||||
5 | 5knlC | 0.45 | 0.33 | 9.53 | 2.22 | MUSTER | MP---SSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFREN------PQEFKKRVRRLVRRSIEMILEHH-------------------------------------------------------- | |||||||||||||
6 | 7jzvA | 0.29 | 0.19 | 5.80 | 1.97 | HHsearch | SGSGSGSGALKRINKELSDLARDPPAQCSAGP-VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSIKLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRD------KYNRISREWTQKYAM-------------------------------------------------------------- | |||||||||||||
7 | 2ob4A | 0.98 | 0.65 | 18.28 | 2.80 | FFAS-3D | --------SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISIL----------------HPPVQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVDAERDGV------------------------------------------------------- | |||||||||||||
8 | 5knlC | 0.44 | 0.32 | 9.42 | 1.25 | EigenThreader | ---MPSSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFREN------PQEFKKRVRRLVRRSIEMIL-----EHH--------------------------------------------------- | |||||||||||||
9 | 3rz3A | 0.99 | 0.69 | 19.34 | 2.59 | CNFpred | -----SPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISIL--------------ERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQVLGTKVDAERDGVKV----------------------------------------------------- | |||||||||||||
10 | 2cyxA | 0.45 | 0.32 | 9.41 | 1.00 | DEthreader | -SEFMAGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDR-----E-QFYKIAKQIVQKSLGL------------------------------------------------------------- | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |