Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCSCCCCCCSCCCCSSSSSCCCCCCCCCCSCCCCCCSCCCCCSSSCCSSCCHHHHHHHCCCCCCCCCCCCCCCCSSSSSCCCSSCCCCCCCCCCCCSCCCCCCSSSSCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCSSSSSSCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELYIIDENKFVCKEDYLSNSSVAKENSLHSATTGSDPSLSPDSQDPSQDDAKDSESANVSDKEAGSNENDDQNLGAKRRGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQLSALGARRHAFFRSPRRMRPLVDRLEPGELIPNGPFSFYGDYQSEYYGPGGNYDFFPQGPPSSQAQTPVDLPFVPSSGPSGTPLGGLEHPLPGHHPSSEAQRFTDILAHPPGDSPSPEPSLPGPLHSMSAEVFGPSPPFSSLSVNGGASYGNHLSHPPEMNEAAVW |
1 | 2jtnA | 0.52 | 0.16 | 4.49 | 1.20 | FFAS-3D | | -PMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETAKQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 3gtgB | 0.04 | 0.04 | 2.13 | 1.29 | MapAlign | | PMVARLRNLTYSSGPIMLRSKNCFIINGPISHVAKLYGRTIKATLIKQDIPIRLLLCADATRVFVNHGVHRNEVSMIRDIKELKIFTDLFIVEEGLVEEESILIAMQPEDLEFTHCEIMGKQAMGVFLTNYNVRMDTMANILYYPQKPLGTTRAMEYLKFRELPAGQNAIVAIACYSGYNQEDSMIMNQSSIDPISSKRDASTPLRSTENGIVDVKVRVRTIINPHAIPSRMTVAHLIECLLSKVAALSGNEGDASPFTDITVEGISKLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAASFLKERLMEASDAFRVHICGICGLMTVIAKLNHNQFECKGCDNKIDIYQIH |
3 | 3mmkA | 0.43 | 0.16 | 4.69 | 1.79 | SPARKS-K | | IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFKRFGTKCTACQQGITQV--VRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETAKG--GGTPLVAGSPIGHENAVQGSAVEVQTYQP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
4 | 4qiwB | 0.06 | 0.06 | 2.66 | 1.24 | MapAlign | | RIGQPYSAPLYLELPIMLKSKACFIINKVVAALITVERKILYVTIVPKPVKFVYVMAPGLYRVYLNIGTVEDVINVALYVKEVYINSDRPLIVVIEYLEENAYVATEVTEEHTHLELIMKAVGFEDRPAGQNFVVAVLSYHGYNMEDAVIINKASIERGLARSTFFRTYEAEEKRYLGGQKDNFEVPEKYYRHLDEGLIFPESKVEGKDVLVGRRRETSVTIVNPHGIPSRMTVGQLIEAIGGKVASLTGRRVDGTAFIGEPEEKLRKELEELGFKHSGREIMYDGITGRRLEADIFIGVIYYQRLHHMVADKMHFGEMERDVLIGHGAAMLLIERLLEESDKTEVWVCESCGHLALEDKRRGKVYCPVCGEDERISKVEMSYAFKLLLDELKAMVIRPSLRL--- |
5 | 2jtnA | 0.51 | 0.16 | 4.49 | 2.74 | CNFpred | | IPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETAKQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 2jtnA | 0.51 | 0.16 | 4.49 | 1.84 | HHsearch | | IPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMEDSRLVCKADYETAKQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 1m6bB | 0.05 | 0.04 | 1.73 | 0.75 | EigenThreader | | QCCHDECAGGCSGPQDTDCFACRCV-PRCPQKLTFPHT---KYQYGGVCVAS-----------CPHNF------VVDQT---SCVA------------CPPDKMEVDKNGLKMCEG---GLCPKACEGTGSGSRFQTVDSSNIDGFVNCFLITGLNGDPWHKI---------------------------------------PALDPEKLNVFR----TVREITNIQSWPP---------------------HMHNFSVFSNLTNLNVTSLGFRSLKNRQLCYHHSLNWTKVLRGPTEERKVCDPLCSSGGCWGPGPGQCLSCRNHCNFLNGEPREFAECFSCHPECQPMEGTATCNGSGSDTCAQCAHFRDGP-----HCVSSCPVQNEENCTQGCKGPELQDCL |
8 | 3mmkA | 0.44 | 0.16 | 4.54 | 1.10 | FFAS-3D | | IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFKRFGTKCTACQQGITQV--VRKAQDFVYHLHCFACIICNRQLATGDEFYLMEDGRLVCKEDYETAKGGGTPLVAGSPIGHENAVQGSA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 3javA | 0.06 | 0.03 | 1.55 | 0.67 | DEthreader | | EK----FKLQFTDCGDGPM------GCKQFGFMQKQIGYDV---EIDTVSLVPFLDYLSDCVT-----KALNPILIWIRSKSVREL-AQDAKE----------LSYYRYQLN-----SKDEIKERFAGFYNDLLTVDYRISLR-L-QAELLLQLREMMKDGEMSL----------ESKRIYTTERD------------------------------------------MSFWSSISFNLAVLM----NLLVAFFGTLAMSLAIAYHLLYLLCHEFFYSLLLF---DLVYR-EETL-------V--NGRPIILTA--------------------------ALA--LILVYLFSIVG------------VTVLSHGGGVGDVLRFAARVIYDLLFFF---I------ |
10 | 2dfyX | 0.31 | 0.11 | 3.43 | 1.76 | SPARKS-K | | WKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGTSSYTKSGMILCRNDYIRLFGNACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYIN-GSLFCEHDRPTALIGGDVGEPTLMGGEFGDEDERLITRLEN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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