Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500
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| SS Seq | CCHHHHHCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCSSSSSCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHSSCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSSSCSSSSSSCCCCSSSSSSSSCCCCCSSSCCSSSSSSSSSSSCCCCCSSSSSSSSSSCCCCCCCCCSSSSSCSSSSSSCCCCCCCCCCCHHHHHCCCSSSSSSSSSSSCCCCCSSSSSSSSCHHHSSCCCSSCCSSSSCCCSSSSSHHHCCCSSSCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC MSALRRKFGDDYQVVTTSSSGSGLQPQGPGQDPQQQLVPKKKRQRFVDKNGRCNVQHGNLGSETSRYLSDLFTTLVDLKWRWNLFIFILTYTVAWLFMASMWWVIAYTRGDLNKAHVGNYTPCVANVYNFPSAFLFFIETEATIGYGYRYITDKCPEGIILFLFQSILGSIVDAFLIGCMFIKMSQPKKRAETLMFSEHAVISMRDGKLTLMFRVGNLRNSHMVSAQIRCKLLKSRQTPEGEFLPLDQLELDVGFSTGADQLFLVSPLTICHVIDAKSPFYDLSQRSMQTEQFEIVVILEGIVETTGMTCQARTSYTEDEVLWGHRFFPVISLEEGFFKVDYSQFHATFEVPTPPYSVKEQEEMLLMSSPLIAPAITNSKERHNSVECLDGLDDITTKLPSKLQKITGREDFPKKLLRMSSTTSEKAYSLGDLPMKLQRISSVPGNSEEKLVSKTTKMLSDPMSQSVADLPPKLQKMAGGAARMEGNLPAKLRKMNSDRFT |
1 | 7lkpA | 0.07 | 0.04 | 1.78 | 0.67 | DEthreader | | ----------------------------------------------KIRFVVELVW------------------VLIWLRNANPFNWYYKAFLGIDST-RK--DP-IYSYDRRTTSFCNALI-QSLESNPLTKIAWR--A------AKPLLMGKLLENWAMDIDVVEKTKIKDRYWDDSFMIILNRCFPFMVLWIVSVKIVEKELRLKETL-------------------SNA--------------VIWCTWF---LDSFSIM---------------------------------SMSIFLLFIMFLFSTAIMLCFLLSTFFSKASLAAA-------CSGVIYF-DFPGDYGTPSTGLLRLGMCVVILD--------------RSGRTIIMSTEALGDRIAIIAQGRLYCSGTPLFLKN------N-FKHYGISD-TPLEEIFLKVTPQ-----------TMKIKDLPV--F--------------SSLARIFQLLLSH |
2 | 3syaA | 0.63 | 0.41 | 11.81 | 4.53 | SPARKS-K | | ------------------------------------------IQRYVRKDGKCNVHHGNVRETY-RYLTDIFTTLVDLKWRFNLLIFVMVYTVTWLFFGMIWWLIAYIRGDMDHIEDPSWTPCVTNLNGFVSAFLFSIETETTIGYGYRVITDKCPEGIILLLIQSVLGSIVNAFMVGCMFVKISQPKKRAETLVFSTHAVISMRDGKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTSEGEFIPLNQTDINVGYYTGDDRLFLVSPLIISHEINQQSPFWEISKAQLPKEELEIVVILEGMVEATGMTCQARSSYITSEILWGYRFTPVLTLEDGFYEVDYNSFHETYETSTPSLSAKELAELANRAESN---------------------------------------------------------------------------------------------------------------------------------- |
3 | 3jycA | 0.53 | 0.34 | 9.68 | 1.71 | MapAlign | | -------------------------------------------NRFVKKNGQCNVEFTNM---------DMFTTCVDIRWRYMLLLFSLAFLVSWLLFGLIFWLIALIHGDLNPGGDDTFKPCVLQVNGFVAAFLFSIETQTTIGYGFRCVTEECPLAVFMVVVQSIVGCIIDSFMIGAIMAKMARPKKRAQTLLFSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRITEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEINEDSPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEEKNQYKVDYSHFHKTYEVPTPRCSAKDLVENKFL-------------------------------------------------------------------------------------------------------------------------------------- |
4 | 3jycA | 0.53 | 0.34 | 9.69 | 1.03 | CEthreader | | -------------------------------------------NRFVKKNGQCNVEFTNM---------DMFTTCVDIRWRYMLLLFSLAFLVSWLLFGLIFWLIALIHGDLENPGGDTFKPCVLQVNGFVAAFLFSIETQTTIGYGFRCVTEECPLAVFMVVVQSIVGCIIDSFMIGAIMAKMARPKKRAQTLLFSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRITEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEINEDSPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEEKNQYKVDYSHFHKTYEVPTPRCSAKDLVENKFLLSNS---------------------------------------------------------------------------------------------------------------------------------- |
5 | 3syaA | 0.64 | 0.42 | 11.92 | 2.41 | MUSTER | | ------------------------------------------IQRYVRKDGKCNVHHGNV-RETYRYLTDIFTTLVDLKWRFNLLIFVMVYTVTWLFFGMIWWLIAYIRGDMDHIEDPSWTPCVTNLNGFVSAFLFSIETETTIGYGYRVITDKCPEGIILLLIQSVLGSIVNAFMVGCMFVKISQPKKRAETLVFSTHAVISMRDGKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTSEGEFIPLNQTDINVGYYTGDDRLFLVSPLIISHEINQQSPFWEISKAQLPKEELEIVVILEGMVEATGMTCQARSSYITSEILWGYRFTPVLTLEDGFYEVDYNSFHETYETSTPSLSAKELAELANRAESN---------------------------------------------------------------------------------------------------------------------------------- |
6 | 3syaA | 0.63 | 0.41 | 11.81 | 4.38 | HHsearch | | ------------------------------------------IQRYVRKDGKCNVHHGNVRET-YRYLTDIFTTLVDLKWRFNLLIFVMVYTVTWLFFGMIWWLIAYIRGDMDHIEDPSWTPCVTNLNGFVSAFLFSIETETTIGYGYRVITDKCPEGIILLLIQSVLGSIVNAFMVGCMFVKISQPKKRAETLVFSTHAVISMRDGKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTSEGEFIPLNQTDINVGYYTGDDRLFLVSPLIISHEINQQSPFWEISKAQLPKEELEIVVILEGMVEATGMTCQARSSYITSEILWGYRFTPVLTLEDGFYEVDYNSFHETYETSTPSLSAKELAELANRAESN---------------------------------------------------------------------------------------------------------------------------------- |
7 | 3syaA | 0.63 | 0.41 | 11.81 | 3.67 | FFAS-3D | | -------------------------------------------QRYVRKDGKCNVHHGNVRET-YRYLTDIFTTLVDLKWRFNLLIFVMVYTVTWLFFGMIWWLIAYIRGDMDHIEDPSWTPCVTNLNGFVSAFLFSIETETTIGYGYRVITDKCPEGIILLLIQSVLGSIVNAFMVGCMFVKISQPKKRAETLVFSTHAVISMRDGKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTSEGEFIPLNQTDINVGYYTGDDRLFLVSPLIISHEINQQSPFWEISKAQLPKEELEIVVILEGMVEATGMTCQARSSYITSEILWGYRFTPVLTLEDGFYEVDYNSFHETYETSTPSLSAKELAELANRAESN---------------------------------------------------------------------------------------------------------------------------------- |
8 | 3syaA | 0.62 | 0.40 | 11.36 | 1.57 | EigenThreader | | ----------------------------------------IQRYVRKDGKCNVHH---GNVRETYRYLTDIFTTLVDLKWRFNLLIFVMVYTVTWLFFGMIWWLIAYIRGDMDHIEDPSWTPCVTNLNGFVSAFLFSIETETTIGYGYRVITDKCPEGIILLLIQSVLGSIVNAFMVGCMFVKISQPKKRAETLVFSTHAVISMRDGKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTSEGEFIPLNQTDINVGYYTGDDRLFLVSPLIISHEINQQSPFWEISK------ALEIVVILEGMVEATGMTCQARSSYIE--ILWGYRFTPVLTLEDGFYEVDYNSFHETYETSTPSLSAKELAELANRAESN---------------------------------------------------------------------------------------------------------------------------------- |
9 | 3spgA | 0.52 | 0.34 | 9.87 | 3.40 | CNFpred | | ------------------------------------------RNRFVKKNGQCNVEFTNMDDKPQRYIADMFTTCVDIRWRYMLLLFSLAFLVSWLLFGLIFWLIALIHGDLENPGGDTFKPCVLQVNGFVAAFLFSIETQTTIGYGFRCVTEECPLAVFMVVVQSIVGCIIDSFMIGAIMAKMAAPKKRAQTLLFSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRITEEGEYIPLDQIDIDVGFDKGLDRIFLVSPITILHEINEDSPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEEKNQYKVDYSHFHKTYEVPTPRCSAKDLVENKFLLSN----------------------------------------------------------------------------------------------------------------------------------- |
10 | 3jycA | 0.56 | 0.23 | 6.61 | 0.67 | DEthreader | | ------N-------------------------------------RFVKKNGQCNVEFT-NM----D-----------------------------------------------------------------------------------------------------------------IM-KMARPKKRAQTLLFSHNAVVAMRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRIT---EYIPLDQIDIDVGFDKGLDRIFLVSPITILHEINEDSPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLASEILWGHRFEPVLFEEKNQYKVDYSHFHKTYEVPTPRCSAKDLVENKFLLS-N----------------------------S----------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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