Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCSCCCCCCSCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MAEDEPDAKSPKTGGRAPPGGAEAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSGPTTGDKSSEPSTLSNEEYMYAYRWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDLKGSESPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARSAHAHVLKAMGLAEEDEHAPRERSSKPKNGLENPEGGAHKKPERLAQPPKDLEARTGAGPLARGERKKSVVESSAPGANNLQVNALVARLPLLLPRAPRSLIPPIPVSPPILAPRLSSGALKVATLPLSSRAGAPPAAVPIINMILPTVPALPGPGPGPGRAPPGGLTQPRGTENREVGIGGDQGPHDKGVKRTAEVPVSEASGQAPPAKAAKQDIEDTASDAKRKRGRPRKKSGGSGERNSTPLKSAAAMESAQSSRLPWETWGSGGEGNSAGGAERPGPMGEAEKGAVLAQGQGDGTVSKGGRGPGSQHTKEAEDKIPLVPSKVSVIKGSRSQKEAFPLAKGEVDTAPQGNKDLKEHVLQSSLSQEHKDPKATPP |
1 | 2vf8B | 0.07 | 0.07 | 2.91 | 1.02 | CEthreader | | PEGACPECHGLGRVYTVTEDSMVPDPSLTIRERAVAAWPQAWGGQNQRDILVTLGIDVDVPWRELPEETRHWILFTDEQPVVPVYPGLTPAETQRALKKKMEPSYMGTFSSARRHVLHTFAN------TESASMKKRVQGYMISEECPLCHGKRLRQEALNVTFAGLDITELSRLPLARVSELLRPYAEEREPGHAERVKNRPEQAIALQRMAADLVKRLDVLLHLGLGYLGLDRSTPTLSPGELQRLRLATQLYSNLFGVVYVLDEPSAGLHPADTEALLSALENLKRGGNSLFVVEHDLDVIRRADWLVDVGPEAGEKGGEILYSGPPEGLKHVPESQTGQYLFADRHTEPHTPREPAGWLELNGVTRNNLDNLDVRFPLGVMTSVTGVSGSGKSTLVSQALVDALAAHFGQPVNPDPEDDEDPADHTAGSARLGGDLAQITRLVRVDQKPIGRTPRSNMATYTGLFDQVRKLFAATPLAKKRGYNAGRFSFNVKGGRCEHCQGEGWVMVELLFLPSVYAPCPVCHGTRYNAETLEVEYRGKNIADVLALTVDEAHDFFADE----SAIFRALDTLREVGLGYLRLGQPATELSGGEAQRIKLATELRRSGRGG |
2 | 5yfpA | 0.08 | 0.07 | 2.86 | 1.12 | EigenThreader | | SKEEIKTMENIDDEVLLEILTDINWSIEDDADSMIERIDLRLAETEYLFNQNL---------------------LSLQKIGPNIRPYEDKVNDECHRIIPTLSLFLMEMSNFSNDIENVESELLKTVSLDEISLNQ-------LLECPIREKNLPWMENQLNLLLKAFQAIGSDGNEVEYNLREISGLKQRLQFYEKVTKIFLNRIVEEMQKKFSNIRGQMIRILTTLLPLILFCKEISQKSYQAIVEISQLQGIDTNDEKMNELSLSQLLNRKERKTNDINPVFKNSFSLLTECLQCIVYQNFVEVFFHISSKHNFEEYIKHF----NDPDAPPILLDTVKVMQSDSRIFQPIVTRLSSYFVELVKAEPTVAPALTFYLENEIKSLESSNHEFLLSAVTRMYTQIKQVWSDNVEEQVLHFERISNATTNGEILPGIL-----DLPVGLKNSEDLFQFAKRSMDIKDTDEGYESIELMNSSFRKLSIAATRSITDYMETISLLVNSNWLTEMLSMDGIFDTFDVEKESYASFLLRDTMPKLTAFVYGVSNIIENRQNLENILLAY-----TSHE--IETLVKRLHTHMVNDFGYHQENAINNVLCDKLWSCIQGQT |
3 | 2pffB | 0.10 | 0.10 | 3.67 | 2.34 | MapAlign | | ----RAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSEFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLSYLKGATGHSQGLVTAVAILSISNLTQEQVQDYVNKTNSHLPAGKQVEIGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGL- |
4 | 2kw3A | 0.99 | 0.11 | 3.05 | 3.68 | HHsearch | | ----------------------GAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSGPTTGDKSSEPSTLSNEEYM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 2pffB | 0.09 | 0.09 | 3.54 | 0.80 | CEthreader | | NCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGVRVIVAGTLDINPDDDYGFKQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
6 | 6ymwA | 0.08 | 0.07 | 2.81 | 0.98 | EigenThreader | | NRATEAARERWKHDFEEAKARGDISIEKNLNVKLWKWYNEMLPLVKEEINHCRSLLSEK---------LSDKKGLNKVDTNRLGYGPYLTKMCVITILELLKLNSTGGVIRAVISVGKAIEMEFRSEQVLKSESQAIRARIGSVLISMLIQVATQSTLLRTKDSTPWTVNEGFLDIPGAQDEMVLPPAPPKNSDNKFSSDRSNRCDTNYKLEIARAFLGEHG-----------KKLGPSGLKWLKIHLSNLFGFDKLPIKDSAENPLTGDRWWTTADKPWQALATCFELNEVMKMDNPEEFISHQTC-----------NGLQHYAALGGDVEGATQVNLVPSDKPQDVYAHVARLVQ-------KRLEIAAEKGDENAKILKD--KITRKVVKQTVMTNVYGVTYVGATFQIAKQLSPIFDDRKESLSAIRELFHSAHLIQDWLGESAKRISKSIRLDVDEKSFKNGNKPDFMSSVAVNPVNARRQKAGLPPNFIHSLDASHMLLSAAECGKQGLDFASHDSYWTHASDIDTMNVVLREQFIKLHEVDLVLRLKEEFDQRY-KNYVKIGKLAQKIIRIRKDLSRKLGRSTTLADEIYFEKKRQEL-----LNEDIT |
7 | 2kw3A | 0.99 | 0.11 | 3.05 | 0.84 | FFAS-3D | | ----------------------GAGEPTTLLQRLRGTISKAVQNKVEGILQDVQKFSDNDKLYLYLQLPSGPTTGDKSSEPSTLSNEEYM---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 3j3iA | 0.13 | 0.12 | 4.08 | 0.99 | SPARKS-K | | LQKLMSRAKLVGAAREGIPNRNDPDNRMDSLISLLEQMQTGVKGFLILLEAPVCDSYDLGRCYVFN---SKPTS------------EAHAAVLLAMCRSVPADAEDVLNPGLVYSSILTYAM--DTSCTDLLQEAQIIACSLQ------------ENRY-FSRIGLPTVVSLYDLMVPAFIAQNSALEGARLSG------------------------------DLSKAVGRVHQMLGMVAAKDIISATHLNSNSRLVTQMASKLTGIGLFDATPQMRIFSEMDTADYADMLHLTIFEGLLVQDASVCTDNGPISFADRAGYDVLVEELTLANIRIEH------HKMPTGAFTTRWVAAKRDSALRLTPRSR-TAHRVD-----MVRECDFNPTMNLKAAGPKRGSGVKSRRRVSEVPLAHVFRSPPRRESTTTTDPQLTRRVPIIDEPPAYESGRSSSPVTSSISTSQHEEEMGLFDAEELPMQQTVIATEARLGRGTLERIQEAAAQGEVTAEKNRRIEAMLSARDPQFTGREQITKMLSDGGLGVREREEWLELVD-KTVGVKGLKEVRSIDGIRRHLEEYGERE--GFAVVRTLLSGNSKHVRRINQLIRES |
9 | 6xu2A | 0.12 | 0.04 | 1.33 | 0.79 | CNFpred | | -----------------------------ALSAIGEGCHQQMEGILNEIVNFVL---------LFLQDP----------------HPRVRYAACNAVGQMATDFAPGFQKKFHEKVIAALLQTMEQGNQRVQAHAAAALINFTEDCPKSLLI----LDNLVKHLHSIMVLKL-----------------QELIQKGTKLVLEQVVTSIASVADTAFVPYYDLFMPSLKHIVENALRLLRGKTIECISLIGLAVGKEKFM-------------------------------------------------------------DASDVMQLLLKTQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 1st6A | 0.05 | 0.03 | 1.27 | 0.50 | DEthreader | | LTAEV-----------------MLVNSMNTVKELLPVLISANRNFTVEKMSAEINEIRDAASTEMLAIDMNAKGWLRDPAPPDAGEQAIRQILDEAGKAGE-L-----CAGKERREILGTCKTLGMTVSQGLDLLTAKVENAARKLE-----------AMTNSKQIAKKIAQNWLADPNGGS--------E---G-EEHIRGIMSEARKVAELCEEP-KE---RD-DILRSLGEIS-L-AK-SD--QI-SLNL-------------------PTVDD-------------------------------------------------------------------------------------------------------------------------------------------------------RGVGQAAIRGLV---------YRQDLLAKCDR----------VDQLAAQLADLAAEARIALQ-LKKTNK---KDEEFPEQKAGE-INQPMMMAARQL--HDEARKWSS-I-------LLMAEMIASEVTLAKEVA--CTD-----KR-IRT-LLQVCEAAASIKIR---------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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