Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCC IAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFGDLNAVSPGNLD |
1 | 2x1gF | 0.09 | 0.08 | 3.19 | 0.67 | CEthreader | | GYTIEGCVTITAVL--LEVVHKCYWPCIHGCMTADENELAESCLKTMVNIIIQPDCHNYPKTAFVLIKMFLDSLSEITKTEWKREND------------------------NEDIIVHIYMLFVSSVERHSTLLLSGITSADPELSILVHRIVQEILHCTDKPGIYPVEESCSTMALAFWYMLQDEVFAHKCWEYIKPLYAHLTRILVRKSEQPDEKSLAKWSSD------DLECFRCYRQDISDTFMYCYDVDYILEILAAMLDEAIADLQRHPTHWTKLEACIYSFQSVAEHRQIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMYIPPAINLLVRGLNSSMSAQATLG |
2 | 2fji1 | 0.07 | 0.05 | 2.24 | 0.88 | EigenThreader | | ----------------GSHMGDKEKETLFKDYLNLIVVKMTEWIGNLEKAEFDVFLERLDGTKTCFQMFTQQVEVAAGTNQ---------------------AKILV--GVVERFSDLLTKRQKNWISKISEEIKKQINYNHKVEYLIAVSNDQMKAADYYGKLVSQITNHLEGGFAEVAQCSSLGLITLMFDDKPYQ------------------EIFSKTWYMGSQAQQIADTLDEYLLDIKPQMNSVLFVNFIDNVIGETIIKFLTAHSFKNAMKRDFEIFYQLFVKVLDGN-------------ES---KDTLITQNFTVMEFFMDLSCEPIDSILDIWQKYLEVYWDSRID |
3 | 6h7wB | 0.06 | 0.04 | 2.02 | 0.93 | FFAS-3D | | ----RDFLWLYNTHSNNPGVPPPPEKQAVGRFESNFVESRRAALEKMLNKIAAHLQL------DADLKLFLESESFNIDVKHKERKENKFVEQDDWFHDRRVYLDALENQLKALLKAMDNMVAADFSASLHALSTVELSPTLSGPLDALSELQLA-IRDVYERQAQQDVLTFGIIIEEYIRLIGSVKQFSQRQKAFHSWHSAESELMKKKAAQDKLLRQG---------KTQQDRLNQVNAEVIDAERKVHQARLLFEDMGRLLRSEL------DRFEREKVEDFKS-------GVETFL-----------ESAVEAQKELIEKWETFLMQ------------------------- |
4 | 7ay1A | 0.12 | 0.12 | 4.23 | 0.73 | SPARKS-K | | DDILESITNRMIKS-------ELEDFELDKSADGIKNNICAFLVMGVCEVLIEYNFSIRFEDILSLFMCYKKLSDILNEKATSDSLLSTALFRDSIQSHQESLSVLRSNEFMRYAVNVALQKVQQLKEDITRVLLWSISLLCLEGLQKIFSAVQQFIQQFLRALDVSVTQRTAFQIRQFQRSLLNLLEALLLVTVLTSLSKLSPQFVQMLSWTSKIDCKSLMNLLFSLHKSPVILLRDLSQDIHGHLEKTNHAEKVLEEVDWLITKLKGQVP-----NQPVEKAIIMQLGTLLTFFHELVQTALPGSCVDTLLKDLCKMYTTLTALVRYYLQVCQSSGGIPKNMEKLVKLSGSHLT |
5 | 4gmxC | 0.06 | 0.04 | 1.87 | 0.97 | CNFpred | | --------------------------------DSETVKIIANIIK-TNVAVCTSMGADFYPQLGHIYYNMLQLYRA---------------------VSSMISAQVA-TPKVRGLRTIKKEILKLVETYISKA------RNLDDVVKVLVEPLLNAVLEDYMNNVPDARAEVLNCMTTVVEKVGVILILQSVFECTLDMINKDFEYPEHRVEFYKLLKVINEKSFAAFLELPPAAFKLFVDAICWAFKHRDVEVNGLQIALDLVKNIERMG-----NVPFANEFHKYFFIFVSETFFVLTDSDH--KSGFSKQALLLMKLISLVYDNK---------------------------- |
6 | 4a01A | 0.06 | 0.04 | 1.84 | 0.83 | DEthreader | | -E-TSLFTYKYGIMVAAILFLGFSTSPQA-----------------------------------------------------------------------------KTC-KPALATAIFSTVSFLLGGVTSLVSGFLGMKIVMFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADGADLVV-AATNVIGLA-GYK-VI-FAFLIV-AMLPYWSAMTMKSVGSAAASIEMIPPGALVMLTPLVVGLFGVETLSGVLGSLVSGVQIAISASNTGGAWNAKDTGDLKDTSGPSLNILIKLMAVESLVFAPFF-------------------- |
7 | 3nz4A | 0.09 | 0.08 | 3.21 | 0.97 | MapAlign | | -KGCASSVDELPATVTRSAMLLRLNSFTYGCSGIWEVMEALEKLLNVSPKV--PLRGSSDLIPLAYIAGLLIGKPSVI----ARIGDDVEVPAPEALSRVGLRPFKLQAKEGLALVSFATALASTVMYDLFAQFTELMLDIAMAAYSSELQYLANPVTTHVHSADINSLALISARKTDEALDILKLMIASHLTAMCQAVDL-RQLEEALVKVVENV----VSTLAD-ECGLPNDTKARLLYVAKAVVYTYLESPCDLPLLLGLKQSCFGSILALKETDTLVDRLAEFEKRLSDRLENEMTAVRVLYSRFLPFYRFVRQTPQEDVQKVFDAIADGRITVPLLHCL------------ |
8 | 5u71A1 | 0.11 | 0.11 | 3.94 | 0.61 | MUSTER | | PILRKGYRQRLELSD-IYQIPSVDSEKLEREWDRELASLINALRRCFFWRFMFYGIFLYLGEVTKAVQPLLLGRIIASYDPDNKEERSIAIYLGIGLCLLFIVRTLLLHPAIFGLHHIGMQMRIAMFSLIYKKTLK-LSSRVLDK--ISIGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVALLMGLIWELLQASAFCGLGFLIVLALFQAGLGRM-MMKYRDQRAGKISERLVITSEMIENIQSVKAYCWE-EAMEKMIENLRQTELKLTRKAAYVRYFNSSAFFFSGFFVVFLSVLPYALIKGIILRKIFTTISFCIVLRMAVTRQFPWAVQTWYDSLIQDFLQKQEYKTLEYN |
9 | 1vt4I | 0.18 | 0.15 | 4.94 | 1.05 | HHsearch | | -------------------------------MDFETG---EHQYQ--YKDILSVFEDAFVDNFD---CKDVQDMPKSILSKIIMSKDA--VSGTLRLF----WTLLSKQEEQKFVEEVLRINYKFLMSPIQPSMMTRM--YIEQRDRLYNDNLQPYLRQALLELRPAWVSYKVQCKETVLEMLQKLLYQIDPNWTSRDHSSNKLRIHSIQAELRRLKFKQVTDFLSAATTTHPDEVKSLLLRLSIIAESRDGLATWDNWKHVNCDKSLNVLEPA-EYRKPTILLSLIWFVIKSDVMHKYSLVSTIPSIYLELKVKLENEYALHRSIVDHY------NIPKTFDSDDLIPPYLDQLD |
10 | 4uvkA | 0.08 | 0.08 | 3.12 | 0.51 | CEthreader | | NESSNETVGELQLLFQRQKVHEFHLLISKDSKKKSKYPPLYANFVEFMFRLMDVANDLQLPLIIDLLTWLSPLSVCKIRSLRYIATLTLYLFQDFLTDHVVDLDKNYLSKLSKQLSVENKKKRPNGKTVEKLESTIAEIQSSKMVTQGIIDNIIKLFVHRFKDVDETIRCESMVHLASWTKSFPEYFLKVTFLKYFGWLLSSVTVRLQVLKILPQLIFERFKERILEIALKNLEVRLSAVQVLVEVASLGYLEDTEILSISSLIEIKVSSLGKNSRYLASVAKFFACITEEKGIFMNLLNESLTEYLQKVPQIGSEKRIHILFQAAEFLYPYFGSLIKDICKVLTFEGEFTHESLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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