>P45452 (278 residues) MHPGVLAAFLFLSWTHCRALPLPSGGDEDDLSEEDLQFAERYLRSYYHPTNLAGILKENA ASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGVPDVGEYNVFPRTLKWSKMNLTY RIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDG PSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALM FPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHP |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | MHPGVLAAFLFLSWTHCRALPLPSGGDEDDLSEEDLQFAERYLRSYYHPTNLAGILKENAASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGVPDVGEYNVFPRTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHP |
Prediction | CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCSSSSSSCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCSSSCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCSCCCSSCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC |
Confidence | 97259999999999986236678877766777478999999999948999876543444358999999999998399864436999999984688899876433456778876556430578705898788999999999999987036842798428998578985125678887766788601011368888776233066433335677523566677764111178888987651155211488888869999999999983989999999998 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | MHPGVLAAFLFLSWTHCRALPLPSGGDEDDLSEEDLQFAERYLRSYYHPTNLAGILKENAASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGVPDVGEYNVFPRTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHP |
Prediction | 43211120111120120110112334566545462152035006400115564544556345403510430062170523440255026204542122333433434344220444403320212144134520341044024203411302134145441202021332312122233132222223121343330312022223322444322021202230110021314433300000101344464140361015001401135786462668 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCSSSSSSCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCSSSCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCSCCCSSCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC MHPGVLAAFLFLSWTHCRALPLPSGGDEDDLSEEDLQFAERYLRSYYHPTNLAGILKENAASSMTERLREMQSFFGLEVTGKLDDNTLDVMKKPRCGVPDVGEYNVFPRTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVTPLNFTRLHDGIADIMISFGIKEHGDFYPFDGPSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFLVAAHEFGHSLGLDHSKDPGALMFPIYTYTGKSHFMLPDDDVQGIQSLYGPGDEDPNPKHP | |||||||||||||||||||
1 | 1gxdA | 0.55 | 0.47 | 13.58 | 1.17 | DEthreader | ----------------------APSP------KTDKELAVQYLNTFYGCPKESCN---LF-VLK-DTLKKMQKFFGLPQTGDLDQNTIETMRKPRCGNPDV-ANYNFPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLGEQGYSLFLVAAHAFGHAMGLEHSQDPGALMAPIYT-Y-TKNFRLSQDDIKGIQELY-GASPDTP---- | |||||||||||||
2 | 1slmA | 0.60 | 0.49 | 13.92 | 3.12 | SPARKS-K | -------------------------------------LVQKYLENYYDLKKDS--------GPVVKKIREMQKFLGLEVTGKLDSDTLEVMRKPRCGVPDVGHFRTFPGIPKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHLTDLTRFRLSQDDINGIQSLYGPPP-------- | |||||||||||||
3 | 1su3B | 0.56 | 0.44 | 12.63 | 1.18 | MapAlign | -----------------------------------VDLVQKYLEKYYNL----------KSGPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDV--------APRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSG--DVQLAQDDIDGIQAIYGRSQN------- | |||||||||||||
4 | 1su3B | 0.56 | 0.45 | 12.85 | 0.93 | CEthreader | -----------------------------------VDLVQKYLEKYYNLKS----------GPVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDV--------APRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSG--DVQLAQDDIDGIQAIYGRSQNPVQPIGP | |||||||||||||
5 | 1su3B | 0.56 | 0.45 | 12.85 | 2.09 | MUSTER | -----------------------------------VDLVQKYLEKYYNLKSG----------PVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVA--------PRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSG--DVQLAQDDIDGIQAIYGRSQNPVQPIGP | |||||||||||||
6 | 1l6jA | 0.53 | 0.44 | 12.58 | 3.46 | HHsearch | -----------------VLFPGDL-----RTNLTDRQLAEEYLYRYGYT--------------LGPALLLLQKQLSLPETGELDSATLKAMRTPRCGVPDLGRFQTFEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHFDDDELWSLGKQGYSLFLVAAHEFGHALGLDHSSVPEALMYPMYRFTE--GPPLHKDDVNGIRHLYG----------- | |||||||||||||
7 | 2mzeA | 0.47 | 0.42 | 12.36 | 2.67 | FFAS-3D | -------------------LPLPQ--EAGGMSELQWEQAQDYLKRFYLYDSETK-----NANSLEAKLKEMQKFFGLPITGMLNSRVIEIMQKPRCGVPDVAEYSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERWTDSSLGINFLYAATHALGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRSNSRKK--- | |||||||||||||
8 | 1su3B | 0.55 | 0.44 | 12.75 | 1.45 | EigenThreader | -----------------------------------VDLVQKYLEKYYNLKSG----------PVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVA--------PRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFS--GDVQLAQDDIDGIQAIYGRSQNPVQPIGP | |||||||||||||
9 | 1slmA | 0.60 | 0.48 | 13.82 | 2.55 | CNFpred | -------------------------------------LVQKYLENYYDLKKD--------SGPVVKKIREMQKFLGLEVTGKLDSDTLEVMRKPRCGVPDVGHFRTFPGIPKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLRFRLSQDDINGIQSLYGPPP-------- | |||||||||||||
10 | 1slmA | 0.59 | 0.47 | 13.42 | 1.17 | DEthreader | -------------------------------------LVQKYLENYDLKKD--------S-GPVVKKIREMQKFLGLEVTGKLDSDTLEVMRKPRCGVPDV-GHF---GIPKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLRFRLSQDDINGIQSLYGPPP-------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |