Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC MYQSLAMAANHGPPPGAYEAGGPGAFMHGAGAASSPVYVPTPRVPSSVLGLSYLQGGGAGSASGGASGGSSGGAASGAGPGTQQGSPGWSQAGADGAAYTPPPVSPRFSFPGTTGSLAAAAAAAAAREAAAYSSGGGAAGAGLAGREQYGRAGFAGSYSSPYPAYMADVGASWAAAAAASAGPFDSPVLHSLPGRANPAARHPNLDMFDDFSEGRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRLSASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQTRKRKPKNLNKSKTPAAPSGSESLPPASGASSNSSNATTSSSEEMRPIKTEPGLSSHYGHSSSVSQTFSVSAMSGHGPSIHPVLSALKLSPQGYASPVSQSPQTSSKQDSWNSLVLADSHGDIITA |
1 | 4hc7A | 0.85 | 0.21 | 5.80 | 1.15 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQTRN--------------------------------------------------------------------------------------------------------------------------- |
2 | 5jcss | 0.07 | 0.07 | 2.68 | 1.28 | SPARKS-K | | DVLSILLSLLEKRELTIPSRGETVKISTVRINEDHQKDSSNKIYNLNMIGMRIWNVIELEEPSEEDLTHILAQKFPILTNLIPKLIDSYKNVKSIYMNTKFISLNKG---AHTRVVSVRDLIKLCERLDILFKNNGINKPDQLIQSSVYDSICFAGAIGEFKAL--EPIIQAIGESLDIASSRIS-----LFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEPLVGETQQLAKMLAKKLTVINVSQQTETG------------------DLLGGYKP---KTVAVPIQENFETLFNATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENE---NAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFNF-------VEGSLVKT |
3 | 4hc7A | 0.84 | 0.21 | 5.80 | 4.24 | CNFpred | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQTRN--------------------------------------------------------------------------------------------------------------------------- |
4 | 2pffB | 0.13 | 0.13 | 4.36 | 1.82 | MapAlign | | --GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG---GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGWNRADNHFKDTYGFSIL |
5 | 4hc7A | 0.84 | 0.21 | 5.80 | 5.79 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEGIQTRN--------------------------------------------------------------------------------------------------------------------------- |
6 | 6e5oY | 0.10 | 0.09 | 3.43 | 1.03 | SPARKS-K | | WLRAKASFVLERLKEMDEKEGDLRGNPFAVEAENRVVDISGFSIGSDGHSIQYLAWKYLENGKREYGKKGRIRFTDGTDIKKSGKWQGLLYGGGKAKVIDFDPDDEQLIILPLAFG---------TRQGREFIWNDLL-------------SLETGLIKLANGRVIEKTIYNKKI--GRDEPALFVALTFERREVVDPSNIKPVNLIGVARGENIPAVIALTDPEGCPLRIGEGAIQAAKEVEQRRAGGYSRKFASKSRNLADSARDLFYHAVTHDAVLVFANLGRQGKRTFMTERQYTKMEGLTSKTYLSKTL-------AQYTSKTCSNCGFTITYADMDVMLVRLKKTSDGWAT---TLNNKELKAEYQITYYNRYKRQTVSKWTKGRRDEALFLLKKRFSHRPVQEQFV-CLDCGHEVHAAEQAALNIARSWLFLNSN |
7 | 3vd6C | 0.82 | 0.18 | 4.98 | 3.63 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RECVNCGATATPLWRRDRTGHYLCNACGLYHKMNGQNRPL--------------TQCTNCQTTTTTLWRRNASGDPVCNACGLYFKLHQVNRPLTMRKDGIQTRNRKAS----------------------------------------------------------------------------------------------------------------------- |
8 | 3h6jA | 0.10 | 0.09 | 3.42 | 1.79 | MapAlign | | -LYESYYDHFGQMDILSDGSLYLIYRRAHVGGSDGRVVFSKLEGGIWSAPTIVAQADFRDVAGGTMPSGRIVAASTVYETGEVKVYVSDDSGVTWVHKFTLARGGADYNFAHGKSFQIPLYAATGVNYELKWLESSDGGETWGEGSTIYSGNTPYNETSYLPVVILAVARVGSGAGGALRQFISLDDGGTWTDQGNVTAQNGDSTDILVAPSLSYIYSEGGTPHVVLLYTNRTTFCYYRTILLARAVAGSSGWTE-----------RVPAYSAPAASGYTSQVVLGGRRILGNL-FRETSSTTSGAYQFEVYLGGVPDFESDWFSVSSNSLYTLSHGLQRSPRRVVVEFARSSSPSTWNIVMPSYFNDGGHKGSGA------------QVEVGSLNIRLGTGAAVWGTGYFGGIDNSATTRLATGYYRVRA----------- |
9 | 3gatA | 0.64 | 0.10 | 2.71 | 2.78 | HHsearch | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRAGTVCSNCQTSTTTLWRRSPMGDPVCNACGLYYKLHQVNRPLTMRKDGIQTRNRKVSSKGKKRR---------------------------------------------------------------------------------------------------------------- |
10 | 5kcs1w | 0.07 | 0.06 | 2.66 | 1.03 | SPARKS-K | | DTPGHMDFLAEVYRSLSVLDGAILLISAKDGVQAQTRILFHALRKMGIPTIFFINKIDQNGIDLSTLSAEIVIKQKVELYPNVCVTNFTESEQWDTVIEGNDDLLEKYMSGKSLEALELEQEESIRFQNCSLFPLYHGSAKSNIGIDNLIFYSSTHRGPSELCGNVFKIEYT-KKRQRLAYILYSGVLHLRDSVRVSEKEKIKVTEMYTSINGELCKIDRAYSGEIVIEFLKLNSVLG---------DTKLLPQRKKIENPHPLLQTTV---EPSKPEQRRYYVDSTHEIILSFLG---KVQEVISALLQEKYHVEIEITEPTVIYMERPLKN------AEYTIHIEVPPNPFWASIGLSVSPLPLSGMQYESSVSLGYLNQSFQNAVMEGIRYGCEQGLYGWNVTDCKICFKYGLYYSPVSTPADFRMLAPIVLEQVLKKA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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