>P43116 (165 residues) TAYLQLYATLLLLLIVSVLACNFSVILNLIRMHRRSRRSRCGPSLGSGRGGPGARRRGER VSMAEETDHLILLAIMTITFAVCSLPFTIFAYMNETSSRKEKWDLQALRFLSINSIIDPW VFAILRPPVLRLMRSVLCCRISLRTQDATQTSCSTQSDASKQADL |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | TAYLQLYATLLLLLIVSVLACNFSVILNLIRMHRRSRRSRCGPSLGSGRGGPGARRRGERVSMAEETDHLILLAIMTITFAVCSLPFTIFAYMNETSSRKEKWDLQALRFLSINSIIDPWVFAILRPPVLRLMRSVLCCRISLRTQDATQTSCSTQSDASKQADL |
Prediction | CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 924589999999999999999999999999999874224667666666655554544444441899999999999999999840699999998146885412489999999998641658998822999999999886036777677766776567887654579 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | TAYLQLYATLLLLLIVSVLACNFSVILNLIRMHRRSRRSRCGPSLGSGRGGPGARRRGERVSMAEETDHLILLAIMTITFAVCSLPFTIFAYMNETSSRKEKWDLQALRFLSINSIIDPWVFAILRPPVLRLMRSVLCCRISLRTQDATQTSCSTQSDASKQADL |
Prediction | 702033113323321331330133002100202443444444454555445454455554453544242032121201012313332331121232454544210201331231213103000002441143025200130434447345443446465366567 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC TAYLQLYATLLLLLIVSVLACNFSVILNLIRMHRRSRRSRCGPSLGSGRGGPGARRRGERVSMAEETDHLILLAIMTITFAVCSLPFTIFAYMNETSSRKEKWDLQALRFLSINSIIDPWVFAILRPPVLRLMRSVLCCRISLRTQDATQTSCSTQSDASKQADL | |||||||||||||||||||
1 | 6wgtA | 0.12 | 0.10 | 3.61 | 1.00 | DEthreader | DNFVLIGSFSFFIPATIMVITYF--ILPPKEDKSPDSPEMKDFHGF--TRNAYIQKYLTMQSISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVCCEVIGALLNVFVWIGYASSAVNPLVYTLFNKTYRSAFSRYIQCQ--Y---------------------- | |||||||||||||
2 | 4zwjA | 0.11 | 0.09 | 3.28 | 1.19 | SPARKS-K | SFVIYMFVVHFTIPMIIIFFCYGQLVFTVKEAAAQQ--------------------QESATTQKAEKEVTRMVIIYVIAFLICWVPYASVAFYIFTHQGSPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTIC--------CGKNVIFKKVSRDKSVTIY | |||||||||||||
3 | 3jacA | 0.08 | 0.07 | 2.92 | 0.55 | MapAlign | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGKHSAATDIASSLSDDQVVKCIYFALSAYQIRCGYPTRILHLNLFLFQGFRLVPFLVELRAVMDWVWTDTTLSLSNWMCVEDIYANI | |||||||||||||
4 | 4e40A1 | 0.05 | 0.05 | 2.21 | 0.41 | CEthreader | SIASGILLRPAVIRNATTEFSRKKSEDILAKGGAAVERASAAVDRVSTAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGSILTSLDNLDKDVKSVEQRAEELETALEKAERQLEKAEKAAEEAETESSKV---------------- | |||||||||||||
5 | 4rnbA3 | 0.16 | 0.13 | 4.42 | 1.35 | MUSTER | EIYPKMYHICFFLVTYMAPLCLMVLAYLQIFRKLWCRQ----GDLSKFRENCKKRAMSFSKQIRARRKTARMLMVVLLVFAICYLPISILNVLKRVFGMFAHWFTFSHWLVYANSAANPIIYNFLSGKFREEFKAAFSC-------------------------- | |||||||||||||
6 | 5zbhA | 0.17 | 0.15 | 4.78 | 1.33 | HHsearch | LSYTTLLVLQYFGPLCFIFICYFKIYIRLKRRNIFEMLRIDEGLRLNGGETSTWDAYDNKYRSSETKRINIMLLSIVVAFAVCWLPLTIFNTVFDWNHQHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQFFFNFCD------------------------ | |||||||||||||
7 | 4zwjA5 | 0.13 | 0.09 | 3.13 | 1.77 | FFAS-3D | ----------FTIPMIIIFFCYGQLVFTVKEAAAQ--------------------QQESATTQKAEKEVTRMVIIYVIAFLICWVPYASVAFYIFTHQFGPIFMTIPAFFAKSAAIYNPVIYIMMNKQFRNCMLTTICCGKN----------------------- | |||||||||||||
8 | 2z73A | 0.06 | 0.06 | 2.63 | 0.62 | EigenThreader | PLMTISCFLIGGIFGFMSIMTMAMISIDRYNVISVLWAIGPIFGWGAYISRDSTTRSNILCMFILGMRLAKISIVIVSQFLLSWSPYAVVALLAQFGWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTF-PWVLTCCQFDDKETEDDKDAETEIPAG | |||||||||||||
9 | 4ww3A | 0.10 | 0.10 | 3.57 | 1.04 | CNFpred | SNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNA--------KELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETEDDKDAETEIPAGE | |||||||||||||
10 | 7ddzA | 0.10 | 0.08 | 2.92 | 1.00 | DEthreader | ---------AVQVSTITLTVIALDRYRCIHLESDGRKVAIVQDG-LRDIGWAHDVRGAIDHYHQRRQKTTKMLVCVVVVFAVCWLPLHAFQLAVDDQVLYKLIFTVFHIIAMCSTFANPLLYGWMNSNYRKAFLSAFRCE------------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |