>P43026 (376 residues) GQLPGGKAPPKAGSVPSSFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADR KGGNSSVKLEAGLANTITSFIDKGQDDRGPVVRKQRYVFDISALEKDGLLGAELRILRKK PSDTAKPAAPGGGRAAQLKLSSCPSGRQPASLLDVRSVPGLDGSGWEVFDIWKLFRNFKN SAQLCLELEAWERGRAVDLRGLGFDRAARQVHEKALFLVFGRTKKRDLFFNEIKARSGQD DKTVYEYLFSQRRKRRAPLATRQGKRPSKNLKARCSRKALHVNFKDMGWDDWIIAPLEYE AFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNV VYKQYEDMVVESCGCR |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | GQLPGGKAPPKAGSVPSSFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGGNSSVKLEAGLANTITSFIDKGQDDRGPVVRKQRYVFDISALEKDGLLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPASLLDVRSVPGLDGSGWEVFDIWKLFRNFKNSAQLCLELEAWERGRAVDLRGLGFDRAARQVHEKALFLVFGRTKKRDLFFNEIKARSGQDDKTVYEYLFSQRRKRRAPLATRQGKRPSKNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR |
Prediction | CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCSSSSSSCCCCCCCCSSSSSSSSSCCCCCCCCCCCCCCSSSSSSSSSSCCCCCCCCCSSSSSSSSCCCCCCCSSSSSCHHHHHHHHHCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCSSCCCSSSSCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCSSSSSSSCCCCSSSSSSCCSSSSCCCCC |
Confidence | 9898866652013477899999838999999998776678887239999999997432446655554334455526986135555555777751248985688980105878999861477432355654315899999941578875312455688415898744997141667888746895054333023444444443346777654455238886056665433331011221123333444431001110001112356766566786301676898601487653137980122322436488766667876304565667761866689987147522346899995899399998179285213169 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | GQLPGGKAPPKAGSVPSSFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGGNSSVKLEAGLANTITSFIDKGQDDRGPVVRKQRYVFDISALEKDGLLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPASLLDVRSVPGLDGSGWEVFDIWKLFRNFKNSAQLCLELEAWERGRAVDLRGLGFDRAARQVHEKALFLVFGRTKKRDLFFNEIKARSGQDDKTVYEYLFSQRRKRRAPLATRQGKRPSKNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR |
Prediction | 8735656345445622452025317166136355654652523014102400442365564545553544444031012023343444454344210202044055630220001023432443243434421211213034242442211001122043363420221322430340264431212121232243142430314433342421000000022244232243122433455453454434534443433444444445663544112230202034133331122053131220102021323442422210201220343436421200000142320200001574403244155010641618 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCSSSSSCCCCCCCCCCCCCCSSSSSSCCCCCCCCSSSSSSSSSCCCCCCCCCCCCCCSSSSSSSSSSCCCCCCCCCSSSSSSSSCCCCCCCSSSSSCHHHHHHHHHCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCSSCCCSSSSCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCSSSSSSSCCCCSSSSSSCCSSSSCCCCC GQLPGGKAPPKAGSVPSSFLLKKAREPGPPREPKEPFRPPPITPHEYMLSLYRTLSDADRKGGNSSVKLEAGLANTITSFIDKGQDDRGPVVRKQRYVFDISALEKDGLLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPASLLDVRSVPGLDGSGWEVFDIWKLFRNFKNSAQLCLELEAWERGRAVDLRGLGFDRAARQVHEKALFLVFGRTKKRDLFFNEIKARSGQDDKTVYEYLFSQRRKRRAPLATRQGKRPSKNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR | |||||||||||||||||||
1 | 3wnkA | 0.06 | 0.04 | 1.60 | 0.67 | DEthreader | -----------------------------------------------------WY-SDSYNQLKLAAYMNY--D-AGTRYEASASMTNVQASTGDKVSFAIN-APEAGDYSLVFRYGN-N--------TG--ANSTLNLYVDG------NFVQKLYFFNQSSWTWKHDAWYQV--P-LTQGAHTVELRYESGN--VG-A--VNL---------DSLTLGTTMRSSLKNAMKDHY-NF----I-T-AYENLLFDS--DV--VP---NDTG-SQFVNLTVSANT------------ASQPSFQTNLPAKIYIETISDVYLQELA--FTS-GT-------YVSFTVPEL--------------------KY-W-NMIYM | |||||||||||||
2 | 3rjrA | 0.22 | 0.19 | 5.88 | 2.71 | SPARKS-K | --PLSTSKTIDMELVKRKRIEAIRGQILSKLRLASPPSVPPGPLPEAVLALYNSTRDRVAGEPEAD-----YYAKEVTRVLMVESGNQIYTPHSLYMLFNTSEPEPVLLSRAELRLLRLKLKVE---------QHVELYQKYSQD---SWRYLSNRLLAPSDSPEWLSFDVTGVVRQWLTEAIEGFRLSAHCSCDTLHVEING-DLATIHGMNRPFLLLMATPL---------------------------ERAQHALDT----NYCFSSTEKNCCVRQLYIDFRDLGW-KWIHEPKGYHANFCLGPCPYIWSLD---TQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVG-RKPKVEQLSNMIVRSCKCS | |||||||||||||
3 | 5hlyA | 0.21 | 0.15 | 4.82 | 1.50 | MapAlign | ----------------EAVKKHI----LNLHLKKRPDVTQPVPKAALLNAIRKVGKVGENGYVEIEDAENELEQTSEIITFAESG------TARKTLHFEISEGDLSVVERAEVWLFLKVPK----ANRTRTKVTIRLFQQQ--KHERSELLLSEKVVDAR-KSTWHVFPVSSSIQRLLDKSSLDVRIACQCQESGA---SLVLLGEEKEQSHRPFL-LQARQS----------------------------------------GLECDGKVNICCKKQFFVSFKDIGWNDWIIAPSGYHANYCEGEC---------------PSH------IAANLKSCCVPTKLRP--SLYYDDGQNIIKKDIQ-NIVEECGCS | |||||||||||||
4 | 5hlyA | 0.19 | 0.15 | 4.80 | 1.28 | CEthreader | -------------QPEVEAVKKHILNLHLKKRPDVTQPVPKAALLNAIRKLHVGKVGENGYVEIEDDIGRRAENELEQTSEIITFAESGTARKTLHFEISKEGSDLSVVERAEVWLFLKVPKANR----TRTKVTIRLFQQQKHERS--ELLLSEKVVD-ARKSTWHVFPVSSSIQRLLDQGKSSLDVRIACEQCQESGASLVLLGEEKEQSHRPFLLQARQSGLECD-----------------------------------------GKVNICCKKQFFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIA---------------------ANLKSCCVPTKLRP--SLYYDDGQNIIKKDIQN-IVEECGCS | |||||||||||||
5 | 5ntuA | 0.22 | 0.18 | 5.55 | 1.95 | MUSTER | -----QNTKSSRIEAIKIQILSKLRLETAPNISKDRQLLPKAPPLRELIDQYD------------EDDDYHATTETIITMPTEK-----------CCFFKFSSKIQNKVVKAQLWIYLRPVETPT-------TVFVQILRLIKPKDGTRYTGIRSLKLDMPGTGIWQSIDVKTVLQNWLAAPASNLGIEIKALDENGHDLAVTFPGPG-EDGLNPFLEVKVTDT-------------------------PKRSRRDFGLDCDE-----HSTESRCCRYPLTVDFEAFGW-DWIIAPKRYKANYCSGECEFVF---LAAYPHTHL---VHQANPRGSAGPCCTPTKMSPINMLYFNGKEQIIYGKIPAMVVDRCGCS | |||||||||||||
6 | 3rjrA | 0.21 | 0.18 | 5.81 | 4.31 | HHsearch | -PLSTSKTID-MELVKRKRIEAIRGQILSKLRLASPPSQPPGPLPEAVLALYNSTRDRVAGE-----PEADYYAKEVTRVLMVESGNFKGTPHSLYMLFNTSELREVLLSRAELRLLRLKLK---------VEQHVELYQKYSQ---DSWRYLSNRLLAPSDSPEWLSFDVTGVVRQWLTRAIEGFRLSAHCSCDSKNTLHVEINGATIHGMNRPFLLLMATPLER------------------------AQHALDT-NY------CFSSTEKNCCVRQLYIDFRDLGW-KWIHEPKGYHANFCLGPCPYIWSLD---TQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGRK-PKVEQLSNMIVRSCKCS | |||||||||||||
7 | 3rjrA | 0.20 | 0.16 | 5.19 | 2.26 | FFAS-3D | ----------------EAIRGQILSKLRLASPPSQG-DVPPGPLPEAVLALYNSTRDRVAGEPEADY-----YAKEVTRVLMVESGNQIYDKHSLYMLFNTSELEPVLLSRAELRLLRLKLK--------VEQHVELYQK----YSQDSWRYLSNRLLAPSDSPEWLSFDVTGVVRQWLTRREAIEGFRLSAHCSCDSKVEINGDLATIHGMNRPFLLLMA-------------------------------TPLERAQHALDTNYCFSSTEKNCCVRQLYIDFRKDLGWKWIHEPKGYHANFCLGPCPYIWSLD---TQYSKVLALYNQHNPGASAAPCCVPQALEPLPIVYYVGRKPKV-EQLSNMIVRSCKC- | |||||||||||||
8 | 5ntuA | 0.14 | 0.11 | 3.79 | 1.37 | EigenThreader | ------QNTKSSRIEAIKIQILSKLRLETAPNISKDVIRQLLPKAPPLRELIDQ------YDEDDDYH----ATTETIITMPTEKCC---------FFKFSSKIQYNKVVKAQLWIYLR---------PVETPTTVFVQILRKPMKDGTRGIRSLKLDMNPGTGIWQSIDVKTVLQNWLAASNLGIEIKALDENGHDLA---VTFPGPGEDGLNPFLEVKVTDTPKR-------------------------------SRRDFGLDCDEHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEYPHTNPRGSAG------------------PCCTPTKMSPINMLYFNGKEQIIYGKIPAMVVDRCGCS | |||||||||||||
9 | 5hlyA | 0.23 | 0.17 | 5.41 | 3.64 | CNFpred | ----------------------VKKHILNMLHLKKRPDVTQPVPKAALLNAIRKLHVGKVGENGYVEIEDD-QTSEIITFAESGT-------ARKTLHFEISKEGLSVVERAEVWLFLKVP----KANRTRTKVTIRLFQQQKH--ERSELLLSEKVVDAR-KSTWHVFPVSSSIQRLLDQGKSSLDVRIACEQCQESGASLVLLGEEKEQSHRPFLMLQARQS----------------------------------------GLECDGKVNICCKKQFFVSFKDIGWNDWIIAPSGYHANYCEGECPSHIA---------------------ANLKSCCVPTKLRPMSMLYYDDGQNIIKKDIQNMIVEECGCS | |||||||||||||
10 | 5x7gA | 0.06 | 0.03 | 1.52 | 0.67 | DEthreader | -----------------------------------------------------W--SDSYIQLKLAAYMNY----IGDRYEASAALTNTQADPGDAVTFSIT-VPEEG-YYSLVFRFANN------S-G---FTATRNLYVDS------AFEIELPFQNQPSWAWSHETWHQ--VY-LTPGTHTIKLAYDAGN--VGAI--N-L---------DSLTLGTSMRSELKEALKQHY-NF----I-T-AYENLLFDPDVVD--N--D-SG-S-QFVNLDMVSAN-------------SANPPTLHTIATKVYVETISGVYLQSLAY--TT-G--------VAFTLPSLEY----------------------W-SMVYM | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |