>P43026 (125 residues) MRLPKLLTFLLWYLAWLDLEFICTVLGAPDLGQRPQGTRPGLAKAEAKERPPLARNVFRP GGHSYGGGATNANARAKGGTGQTGGLTQPKKDEPKKLPPRPGGPEPKPGHPPQTRQATAR TVTPK |
Sequence |
20 40 60 80 100 120 | | | | | | MRLPKLLTFLLWYLAWLDLEFICTVLGAPDLGQRPQGTRPGLAKAEAKERPPLARNVFRPGGHSYGGGATNANARAKGGTGQTGGLTQPKKDEPKKLPPRPGGPEPKPGHPPQTRQATARTVTPK |
Prediction | CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCC |
Confidence | 95267999999999988667666633871105699998765344576558988778867787676778777787666773333432356765400168888999989999732354441222689 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | MRLPKLLTFLLWYLAWLDLEFICTVLGAPDLGQRPQGTRPGLAKAEAKERPPLARNVFRPGGHSYGGGATNANARAKGGTGQTGGLTQPKKDEPKKLPPRPGGPEPKPGHPPQTRQATARTVTPK |
Prediction | 65234311132233323313202301334634654643434145363674443454334434333332363654545344444433244565535633566544645445456446334444458 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCC MRLPKLLTFLLWYLAWLDLEFICTVLGAPDLGQRPQGTRPGLAKAEAKERPPLARNVFRPGGHSYGGGATNANARAKGGTGQTGGLTQPKKDEPKKLPPRPGGPEPKPGHPPQTRQATARTVTPK | |||||||||||||||||||
1 | 2uvnA | 0.05 | 0.05 | 2.30 | 0.43 | CEthreader | GVGADGDTAGTLSILAFTFTMVTGGNDTVTGMLGGSTSPVQGLARTTTRDVTIGDTTIPAGRRVLLLYGSANRDERQYGPDAAELDVTRCPRNILTFSHGAHHCLGAAAARMQCRVALTELLARC | |||||||||||||
2 | 5tw1F | 0.05 | 0.05 | 2.30 | 0.50 | EigenThreader | RDMQWICRDGDRAKNHLLEANLRLVVSLAKRYTMAFLDLIQEGNLGLIRAVEKFKFSTYATWWIRQAITRAIPVHMVEVINKLGRIQRELLQDLGRESEREAGVVRLRFGLTDGQPRTLDEIGQV | |||||||||||||
3 | 2ftcN | 0.12 | 0.08 | 2.85 | 0.41 | FFAS-3D | ------------------------------------GDTVEILEGKDAGKQGKVVQVIRQRNWVVVGGLNTHYRYIGKTMDYRGTMIPSEADPMDRKPTEIEWRFTEAGERVRVSTRSGRII--- | |||||||||||||
4 | 7jjvA | 0.16 | 0.14 | 4.78 | 1.27 | SPARKS-K | --------------MQCDGLDGADGTSNGQAGASGLAGGPNCNGGKGGKGAPTAGGAGGVGGAGGNGGAGGSGGNSDVAAGGAGAAAAGGAGTGGTGGNKPGGAPGAGGAGTPAGSAGSPGQTTV | |||||||||||||
5 | 5h0rF | 0.07 | 0.02 | 0.66 | 0.50 | CNFpred | --VASILPTFVYTCCQVGTAIMSGILTHVES---------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5xjcQ | 0.10 | 0.09 | 3.29 | 0.83 | DEthreader | -ESLEV-DLIRSQVQQLERRFLSQLIQFIL---KVHYERFIELMIDLEALLPTR-RWFNTILDDLLCLDLKFYTGFE-INDQTGNALQFLYR--G--VVGPPTGKTAIVTALNETDFGRVNVLSE | |||||||||||||
7 | 4btgA | 0.07 | 0.07 | 2.91 | 0.68 | MapAlign | EARASNDLKRSMFNYYAAVMHYAVAHNPEVVVAAEQGSLYLVWNVRTELRIPVGYNAIEGGSIRTPEPLEAIAYNDAYSVTIRNKRYTAEVKEFELLGLGQRRERVRILKPTVAHAIIQMW---- | |||||||||||||
8 | 1jvrA | 0.12 | 0.12 | 4.24 | 0.80 | MUSTER | PTPIPKAPRGLSTHHWLNFLQAAYRLQPGPSDFDFQQLRRFLKLALKTPIWLPIDYSLLASLIPKGYPGRVVEIINILVKNQVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVEPTTTQ | |||||||||||||
9 | 6yghA | 0.24 | 0.08 | 2.50 | 0.40 | HHsearch | DRARRLLWWHYNCLLWNYISRLRTWLSTPEK-YRGRDAP-TIE---A------------------------------------------------------------------------------ | |||||||||||||
10 | 3nc3A | 0.05 | 0.05 | 2.30 | 0.36 | CEthreader | KDILALILNVLLAATEPADKTLALMIYRAIAETLRYKPPVQLIPRQLSQDTVVGGMEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEI | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |