Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHCCCCCCSHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCSSSSSSCCCCSCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MTKSNGEEPKMGGRMERFQQGVRKRTLLAKKKVQNITKEDVKSYLFRNAFVLLTVTAVIVGTILGFTLRPYRMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVTGMAALDSKASGKMGMRAVVYYMTTTIIAVVIGIIIVIIIHPGKGTKENMHREGKIVRVTAADAFLDLIRNMFPPNLVEACFKQFKTNYEKRSFKVPIQANETLVGAVINNVSEAMETLTRITEELVPVPGSVNGVNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAPVGILFLIAGKIVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFELNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIEENEMKKPYQLIAQDNETEKPIDSETKM |
1 | 3kbcA | 0.29 | 0.20 | 6.13 | 1.00 | DEthreader | | --------------------------------------------IE-YPVLQKILIGLILGAIVGLLGYAHAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAA-SIS-PAR--LGRVGVKIVVYYLLTSAFAVTLGIIMARLFNPGAGIH-LAVGGQQFQP----------------------PFGALAN------------------------------------------GQVLPTIFAIILGIAITYLMNS--ENE--RK-AETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIAYVMEQGVHVVGELAKVTAAVYVGLTLQILLVYFVLLKI-YGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVA-KEMGISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLNVAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------------------------------- |
2 | 6s3qA | 0.62 | 0.49 | 13.94 | 3.88 | SPARKS-K | | ---------------------------------------EWKRFLKNNWVLLSTVAAVVLGITTGVLVREHRLSTLEKFYFAFPGEILMRMLKLIILPLIISSMITGVAALDSNVSGKIGVRAVVYYFCTTLIAVILGIVLVVSIKPGVT------------QVSTVDAMLDLIRNMFPENLVQACFQQYKTKREEVKPK---------------------------TKEYKIVGMYSDGINVLGLIVFCLVFGLVIGKMGEKGQILVDFFNALSDATMKIVQIIMCYMPLGILFLIAGKIIEVEDWEI-FRKLGLYMATVLTGLAIHSIVILPLIYFIVVRKNPFRFAMGMAQALLTALMISSSSATLPVTFRCAEENNQVDKRITRFVLPVGATINMDGTALYEAVAAVFIAQLNDLDLGIGQIITISITATSASIGAAGVPQAGLVTMVIVLSAVGLPAEDVTLIIAVDWLLDRFRTMVNVLGDAFGTGIVEKLSKKELEQMDVS---------------------------------- |
3 | 5llmA | 0.79 | 0.58 | 16.27 | 2.00 | MapAlign | | ----------------------------------------VKSFLRRNALLLLTVLAVILGVVLGFLLRPYPLSPREVKYFAFPGELLMRMLKMLILPLIVSSLITGLASLDAKASGRLGMRAVVYYMSTTIIAVVLGIILVLIIHPE-----------------VLDCFLDLARNIFPSNLVSAAFRSYST---------------------------------------TPVGQEVEGMNILGLVVFSMVFGFALGKMGEQGQLLVDFFNSLNEATMKLVAIIMWYAPLGILFLIAGKIVE-------GGQLGMYMVTVIVGLVIHGLIVLPLIYFLITRKNPFVFIAGILQALITALGTSSSSATLPITFKCLEENNGVDKRITRFVLPVGATINMDGTALYEAVAAIFIAQ---------QIITISITATAASIGAAGIPQAGLVTMVIVLTAVGLPTDDITLIIAVDWLLDRFRTMVNVLGDALGAGIVEHLSRKELEKQ------------------------------------- |
4 | 5llmA | 0.79 | 0.58 | 16.43 | 1.20 | CEthreader | | ------------------------------------TKEDVKSFLRRNALLLLTVLAVILGVVLGFLLRPYPLSPREVKYFAFPGELLMRMLKMLILPLIVSSLITGLASLDAKASGRLGMRAVVYYMSTTIIAVVLGIILVLIIHPE-----------------VLDCFLDLARNIFPSNLVSAAFRSYSTTP---------------------------------------VGQEVEGMNILGLVVFSMVFGFALGKMGEQGQLLVDFFNSLNEATMKLVAIIMWYAPLGILFLIAGKIVEG-------GQLGMYMVTVIVGLVIHGLIVLPLIYFLITRKNPFVFIAGILQALITALGTSSSSATLPITFKCLEENNGVDKRITRFVLPVGATINMDGTALYEAVAAIFIAQ---------QIITISITATAASIGAAGIPQAGLVTMVIVLTAVGLPTDDITLIIAVDWLLDRFRTMVNVLGDALGAGIVEHLSRKELEKQDA----------------------------------- |
5 | 6gctA | 0.49 | 0.39 | 11.20 | 2.56 | MUSTER | | --------------------------------------DQVRRCLRANLLVLLTVVAVVAGVALGLGVSALALGPERLSAFVFPGELLLRLLRMIILPLVVCSLIGGAASLDPGALGRLGAWALLFFLVTTLLASALGVGLALALQPGAASA---------ASKEVLDSFLDLARNIFPSNLVSAAFRSYSTTYEERNITGTRVK--------------------------VPVGQEVEGMNILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMEDVGLLFARLGKYILCCLLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDGAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTVLNVEGDALGAGLLQNYVDRT----------------------------------------- |
6 | 6gctA | 0.49 | 0.39 | 11.25 | 5.59 | HHsearch | | --------------------------------------DQVRRCLRANLLVLLTVVAVVAGVALGLGVSGAGLGPERLSAFVFPGELLLRLLRMIILPLVVCSLIGGAASLDPGALGRLGAWALLFFLVTTLLASALGVGLALALQPGAASAAS---------KEVLDSFLDLARNIFPSNLVSAAFRSYSTTYEERNIT--------------------------GTRVKVPVGQEVEGMNILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMEDVGLLFARLGKYILCCLLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDGAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTVLNVEGDALGAGLLQNYVDRT----------------------------------------- |
7 | 6gctA | 0.49 | 0.39 | 11.20 | 3.52 | FFAS-3D | | --------------------------------------DQVRRCLRANLLVLLTVVAVVAGVALGLGVSGAGGGPERLSAFVFPGELLLRLLRMIILPLVVCSLIGGAASLDPGALGRLGAWALLFFLVTTLLASALGVGLALALQPGAASAASKEVLDS---------FLDLARNIFPSNLVSAAFRSYSTTYEERN--------------------------ITGTRVKVPVGQEVEGMNILGLVVFAIVFGVALRKLGPEGELLIRFFNSFNEATMVLVSWIMWYAPVGIMFLVAGKIVEMEDVGLLFARLGKYILCCLLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDGAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTVLNVEGDALGAGLLQNYVDR------------------------------------------ |
8 | 6gctA | 0.43 | 0.32 | 9.42 | 2.22 | EigenThreader | | ---------------------------------DQVRRCLRAN-----LLVLLTVVAVVAGVALGLGVSGAGGAF------VFPGELLLRLLRMIILPLVVCSLIGGAASLDP-------GWALLFFLVTTLLASALGVGLALALQPGAAS-------AASKEVLDSFLDLARNIFPSNLV--SAAFRSYSTTYEERNITGT-----------------------------RVKEVMNILGLVVFAIVFGVALRKLG---PEGELLIRFFNSFN----EVLVSWIMWYAPVGIMFLVAGKIVEMEDVGLLFARLGKYILCCLLGHAIHGLLVLPLIYFLFTRKNPYRFLWGIVTPLATAFGTSSSSATLPLMMKCVEENNGVAKHISRFILPIGATVNMDGAALFQCVAAVFIAQLSQQSLDFVKIITILVTATASSVGAAGIPAGGVLTLAIILEAVNLPVDHISLILAVDWLVDRSCTVLNVEGDALGAGLLQNYVDRT----------------------------------------- |
9 | 6s3qA | 0.62 | 0.49 | 13.89 | 2.56 | CNFpred | | -----------------------------------------KRFLKNNWVLLSTVAAVVLGITTGVLVREHNLSTLEKFYFAFPGEILMRMLKLIILPLIISSMITGVAALDSNVSGKIGVRAVVYYFCTTLIAVILGIVLVVSIKPGVTQ------------VSTVDAMLDLIRNMFPENLVQACFQQYKTKREEVK-----------------------------TKEYKIVGMYSDGINVLGLIVFCLVFGLVIGKMGEKGQILVDFFNALSDATMKIVQIIMCYMPLGILFLIAGKIIEVEDW-EIFRKLGLYMATVLTGLAIHSIVILPLIYFIVVRKNPFRFAMGMAQALLTALMISSSSATLPVTFRCAEENNQVDKRITRFVLPVGATINMDGTALYEAVAAVFIAQLNDLDLGIGQIITISITATSASIGAAGVPQAGLVTMVIVLSAVGLPAEDVTLIIAVDWLLDRFRTMVNVLGDAFGTGIVEKLSKKELEQMDVS---------------------------------- |
10 | 6s3qA | 0.21 | 0.14 | 4.51 | 1.00 | DEthreader | | -------------------------------------E--WKRFLKNNWVLLSTVAAVVLGITTGVLVRRNLSLKFYFAFPGEILMRMLKLIILPLISSMITGVAALDSNVSGKIGVRAVVYYFCTTLIAVILGIVLVVS-IK---PG-VTQ-------------------------------NLVQACFQQ----------------------------------------MYSDGINVGLIVFCLVFGLVIGKMG--E--KGQILVDFFNALSDATMKIVQIIMCYMPLGILFLIAGKII-EVEDWEIFRKLGLYMATVLTGLAIHSIVILPLIYFIVVKPFAMGMAQALLTALMIS--------SSSATLPVTFRCAEITRFVLPVGATINMDGTALYEAVAAVFIAQ-LN--D-L-D---LGIGQIITISITATSASAGLVTMVIVLSAVGL-----PAEDVTLIIAVDWLLDRFRTMVNVLGDAFGTGIVEKLSKKELEQ-----------------------MDVS---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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