Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MVALRGLGSGLQPWCPLDLRLEWVDTVWELDFTETEPLDPSIEAEIIETGLAAFTKLYESLLPFATGEHGSMESIWTFFIENNVSHSTLVALFYHFVQIVHKKNVSVQYREYGLHAAGLYFLLLEVPGSVANQVFHPVMFDKCIQTLKKSWPQESNLNRKRKKEQPKSSQANPGRHRKRGKPPRREDIEVAGTAGGAEVAPVAQVALCLETVPVPAGQENPAMSPAVSQPCTPRASAGHVAVSSPTPETGPLQRLLPKARPMSLSTIAILNSVKKAVESKSRHRSRSLGVLPFTLNSGSPEKTCSQVSSYSLEQESNGEIEHVTKRAISTPEKSISDVTFGAGVSYIGTPRTPSSAKEKIEGRSQGNDILCLSLPDKPPPQPQQWNVRSPARNKDTPACSRRSLRKTPLKTAN |
1 | 6rjkA | 0.07 | 0.07 | 2.83 | 0.49 | CEthreader | | DFLFGVATASFQIEGATKVDGRKPSIWDAFCNMPGHVFGRHNGDVACDHYNRWEDDLDLIKEMGVEAYRFSIAWPRIIPDGFGPINEKGLDFYDRLVDGCKARGIKTYATLYHWDLPLTLMGDGGWASRSTAHAF--QRYAKTVMARLGDRLDAVATFNEPWCAVWLSHLYGIHAPGERNMEAALAAMHHINLAHGFGVEASRHVAPKVPVGLVLNAHSVIPASNSDADMKAAERAFQFHNGAFFDPVFKGEYPAEMIEALGSRMPVVEAEDLSIISQKLDWWGLNYYTPMRVADDATEGAEFPATKQAPAVSDVKTDIGWEVYAPALHSLVETLYEITENGACYNMGVENGEVDDQPRLDYYAEHLGIVADLVKDGYPMRGYFAWSLMDNFEWAEGYRMRFGLVHVDYETQV |
2 | 5ctqA | 0.07 | 0.06 | 2.64 | 0.65 | EigenThreader | | RMARQKMSEIFPLTEELWLEWLHDEISMAQDGLDREHVYDLFEKAVKDYIC--PNIWLEYGQYSVGGIGQKVFERALSSVGLHMTK--GLALWEAYREFESAIVEAA-----RLEKVHSLFRRQLAIPLMEATFAEYEEWSNYNKALQQLEKYKPYEEALLQAEAPRLAEYQAYIDFEMKIGDPARIQLIFERALVENCLV--PDLWIRYSQYLDRQLKVKDLVLSVHNRAIRNCPWT--------VALWSRYLLAMERHGVDHQVISVTFEKALNAGFIQATDYVEIWQAYLDYLRRRVDFKQDSSAFTRALEYLKQEVEERFNESGDPSCVIMQNWARIEARLNAKYANMWLEYYNLERAHGAVQCT-----SDYPEHVCEVLLTMERTEGSLEDWDIAVQKTETRLARVN |
3 | 5o9zH | 0.18 | 0.14 | 4.50 | 0.55 | FFAS-3D | | ----------------LDLSGDSVKTIAKL--WDSKMFAEIMMK--IEEYISKQAKASEVMGPVEAAPEYRV----------IVDANNLTVEIENELNIIHK-----FIRDK----YSKRFPELE------SLVPNALDYIRTVKELGNSLDCKNNENLQQILTNATIMVVSVTASTTQGQQLSEEELERLEEACDSFIAPIIGASTAAKIMGVAGGLTNLSKMPAIMLLGAQRKTLSGFSSTSVLPHTGYIYHIVQSLPPDLRRKAARLVAAKCTLAAREPPPVKQVKPLPAPLDGQRKKRGGRRYRKMK-ERLGLTEIRKQANRSFGEIEEDAYQEDLGFSLGHLGKARISKTLQRTLQKQSVVY---------------------------------------------- |
4 | 7abiU | 0.11 | 0.10 | 3.73 | 0.69 | SPARKS-K | | LPMWMGLQLARTP----KLRKFWNLIKKNDEKMD----PEAREQAYQERRLSQLIQKFISVLKSVPLSEPV----------TMDKVHYCERFIELMIDLETRRWFNTILDDSHLLVHCYLSNLVRREEDGHLFSQLLDMLKFYTTIHYDRITSLQRAAFAHFPELYDFALSNVAEVDTRGPLSSNTLHQVASKNEDTTFDKEFLLELLVSRHERRISQNQMPLYPTEKIIWDENIVPTEYY-----SGEGCLALPKLNLQFLTLLRNFNLFRLESTYEIRQDIEDSVSRMKPWQSEYGGVVFGGWARMAQPIVAFTVEVAKPNIG--ENWPTRVRADVTINL----------NVRDHIKDEWEGRKHDVCFLITPTKPYGTKFDRRRPRVIEPRPNLRGESRTFRVFLDPNQY |
5 | 4yknA | 0.10 | 0.03 | 0.98 | 0.54 | CNFpred | | ----------------------------------------CLEKYLTDDKLSQYLIQLVQVLKYEQYL----NLLVRFLLKKALTNQRIGHFFFWHLKSEMHN--KTVSQRFGLLLESYCRACGMYLKHLNRQVEAMEKLINLTDILKQEKK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 5mz61 | 0.07 | 0.05 | 1.95 | 0.67 | DEthreader | | ---------------EQTAELQQEISELFIAEFGPIDMNS-LS--KL--A----------------------------------------R-ITSYY------------------A--SSE----------------Y--FQGLAKYQRTACKMFITWQTLRKEAM--E-----------------C-RSKDREIFAIPACLILAKEAALRMALRDVKSDPTRSFSRYELASYVSWLT-AASDLVIGLASQFFRCALVNVAQTYSIIEEAGSEK-------------LDSKESFLDMILAVTQLGRQLFPMECNMRPTMPLAHYSQAVELMDKFTFLLD-E-PHLSQFCWERLP-FDEYPYVGRQVS-VRTGKTAILD-AMAKCPLIVGLIMIDRQLSMHVVMYG-------- |
7 | 2pffB | 0.07 | 0.07 | 2.75 | 1.18 | MapAlign | | AAKLLQENDTTLVKTKELIKNYITARIMAKRPGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLFTPGELRSGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------- |
8 | 5az4A | 0.11 | 0.11 | 3.91 | 0.61 | MUSTER | | IKA-LNIGTSSRNLYALDSVHGWNTKTQRAEDENDTGTTQFYTTSKNSVEVTEKGVDAGSLF--AKGQ-RDGQGIWVSYADATYSTNKVGV------NAFDPNLQQNQTAAFWGTANQKVNLDITLNGVQNADIQSIDDAIAYINTFTAPTDTRDGTGVKAVKNKDGSGIDFVNDNADGTTDNMKNINLVVANTNTAGELWNAVWNNNNQTFTFNNNGNGQAGTPTINKNGSS-LWTATNITFTPQPPQAATNVQLTGGLNAQIITAHKYIYSSNPVDIGP---MYNPDGGPAFQPGANATTRPTEPGSAAYWDAVNGGLLNTNVRTFRTTEDLRELLQRDARYGVDYDGSGTFAAADINQNIKTADGHFAISNANEQSTVPPNAINGVGNATTTDPKNMSFNITAYSNKQGT |
9 | 2pffB | 0.21 | 0.19 | 5.91 | 0.92 | HHsearch | | -----------------------------MDAYSTRPLTLSHGHLLVPTASFFISQL---QEQFNKILPEPTEGFA--ADDEPTTPAELVGKFLGY------VSSLVEPSKVGQFDQVLNLCLTEFENLEGNDIHA--LAAKLLQTLVKTKELIKNYITARIFDKSALFRAVGGNAQLGTDDYFEELRDLYQTYHVL-VGDLIFSAETLEGLNILEWLENPSNTPDKDLLSIPISCPLHTAKLL-GFTPGELRSYLKGATGHSVTAVAFFVSVRKAITVLFFIGVRCYEALPPSILEDSEGVPSPMLSISNLTQEQVSLVNGAKNLVVSGPPQSLAKAPSGLDQSRI-----PFSERKLKFS---NRF-LPVASPFHLVKDLVKNNVSFNAKDIQIPVTSLRVLIRLPVKWET |
10 | 3odmA | 0.06 | 0.06 | 2.68 | 0.49 | CEthreader | | EVMIDFEGKLTPYHQTSQIALGLISN--GIIPGKDVRVTPRIPNANKESVFRQLMSIMSIIETNVQSKLTGTPAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSV-----RIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDLRIMIARSDT-AMSYGLISGVLSVLMAVDGAYKWGEKHGVTISPILGCGSLPFRGHFSEENIDEILATYSGIKTFTFQSALRYDHGEEATKHAVRELKEKIAQSKPRNFSEEDKDLMKEFIGICSKHYLQTFLKVIDTVSFVSDFIPKNRDRLTANLDNVADLVKDEVLKQEILSIDNSKEYAVLGMPPELMGMGRALNEIKTKYGQEGIDKLLEIYPILRKDLAFAARFANGGVSKKIIDEEARQEYKEDMKYVNE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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