Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHSSSCCCCCCCCCCHHHHHHHHHHCCCC VPFSELGTTPSGGGFFQGISFPEISTRPPLGSTELQAAKKVHTSKGDLPREPLVATNLPGRGQLQKLASERNLFISCKSSHDRCLEKSSSSSSQPEHSAMLVSTAASPSLIKETTTGYYKDIVENICGREKSGIQPLCPERSHISDQSPLSSKRKALEESESSQLISPPLAQAIRDYVNSLLVQGGVGSLPGTSNSMPPLDVENIQKRIDQSKFQETEFLSPPRKVPRLSEKSVEERDSGSFVAFQNIPGSELMSSFAKTVVSHSLTTLGLEVAKQSQHDKIDASELSFPFHESILKVIEEEWQQVDRQLPSLACKYPVSSREATQILSVPKVDDEILGFISEATPLGGIQAASTESCNQQLDLALCRAYEAAASALQIATHTAFVAKAMQADISQAAQILSSDPSRTHQALGILSKTYDAASYICEAAFDEVKMAAHTMGNATVGRRYLWLKDCKINLASKNKLASTPFKGGTLFGGEVCKVIKKRGNKH |
1 | 2v0xB | 0.75 | 0.31 | 8.77 | 1.72 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------H----SLTTLGPLHESILKVVEEEWQQIDRQLPSVACRYPVSSIEAARILSVPKVDDEILGFISEATPAAATQASSTESCDKHLDLALCRSYEAAASALQIAAHTAFVAKSLQADISQAAQIINSDPSDAQQALRILNRTYDAASYLCDAAFDEVRSA---CAGSSTGRRYLWLKDCKISPASKNKLTVAPFKGGTLFGGEVHKVIKKR---- |
2 | 2v0xA | 0.79 | 0.30 | 8.46 | 1.12 | CNFpred | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SFPLHESILKVVEEEWQQIDRQLPSVACRYPVSSIEAARILSVPKVDDEILGFIS-----------STESCDKHLDLALCRSYEAAASALQIAAHTAFVAKSLQADISQAAQIINSDPSDAQQALRILNRTYDAASYLCDAAFDEVRMSACAMGSSTMGRRYLWLKDCKISPASKNKLTVAPFKGGTLFGGEVHKV-------- |
3 | 4xriA | 0.06 | 0.06 | 2.70 | 1.08 | MapAlign | | IILENSLSPDATLRHAAEQQLTHAAETNFSQYLLTLVQALAAAAGIALKNAFSAREFARQAALQAKWLNQTDQETRTRVKQLALETLASPNSKAGQAAAQVIAAIAAIELPRNQWPELMHALVRNASEGTAIGFICETQDTDLRNSLVGHSNAILTAVVQGARKEEPNNEVRFAAITALGDSLEFVGNNFKHEGERNYIMQVVCEATIQQGAFGCLNRIMALYYEHMRYYMEKALFGLTILGMKSDDEDVAKLAVEFWSTVCEEEIAILTKQDEDASDDEYNISRAAYQCLQLYAQAVGSTIIPPVIQFVEHNLHADWHFRDAAVSAFGAIIVKTGMQPLIAMMEDESIQVRDSTAYALGRITEACSEIRSLFNGLNDSLSAVASLSTVILQRLEETLPLQVVSVEDKLILEDMQTSLCTVLQATVQRLDKEAMEEEFAKYMEAFAPFLYNALGNQEEPSLCSMAIGLVSDVTRSLGERSQPYCDNFMNYL |
4 | 2v0xB | 0.76 | 0.31 | 8.88 | 6.09 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HS-------------------LTTLGPLHESILKVVEEEWQQIDRQLPSVACRYPVSSIEAARILSVPKVDDEILGFISEATPAAATQASSTESCDKHLDLALCRSYEAAASALQIAAHTAFVAKSLQADISQAAQIINSDPSDAQQALRILNRTYDAASYLCDAAFDEVRSA-CA-G-SSTGRRYLWLKDCKISPASKNKLTVAPFKGGTLFGGEVHKVIKKR---- |
5 | 1vt4I | 0.06 | 0.06 | 2.65 | 0.59 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
6 | 1st6A | 0.08 | 0.08 | 3.04 | 0.75 | EigenThreader | | KGWLRDPNAPPGDAGILDEAGKAGELCAGKERREILGTCKTLGQMTDQLADLRARGQGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGGIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQSKTNRAVANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANV--------MMGPYRQDLLAKCDRVDQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKARMQEAMTQEVSDVFS------------DTTTPIKLLAVAATAPSDTPNREEVFEERAANFENHAARLGATAEKAAAVGQATVKSARELTPQVVSAARILLRNPG-NQAAYEHFETMKNQWIDNVEKMTGLVDEAID---TKSLLDASEEAIKKDLDKCKVAMANMQPQMLVAGATSIARRANRILLVAK |
7 | 6x02A | 0.09 | 0.08 | 3.08 | 0.93 | FFAS-3D | | ------------------NADLDLDDNKQL--YQIWIVMVWLKENTYVMERPKNVPTSKWLDEALEEACGIQEYLNPVIDTKHSLWRQQAGLDPYERAIYSYLSGAIPNQEVLQYSDHLNQILQTEIENYLLENNQVGTDELILPLPSHALTVQEVLNRVASREMLLDDKPYLLRIVTHLAIC-LDIINPGSVEEVDKSKLITTYISLLKLQGLYEATFLNESDCLEACSFILSSLEDPQVRKKQIETINFLRLPA--SNILRRTTQRVFDETEQEYSPSN--EISISFDVNNIDMHLIYGEWVDAVHSIIALSRRFLLNGRVKALEQFMERNNIGEICKNYELEKIADNISKDENEDQFLEEITQYEHLIKGIREYEIPTLIEKLQGFSKDTFELIKTFLNFADSADYEILYEIRALY--TPFLLMELHKKLVEAAKLLKIPKFISEALAF--TSLVANENDKIYLLFQSSGKL--KEYLDLVARTA--- |
8 | 2v0xB | 0.73 | 0.30 | 8.49 | 0.83 | SPARKS-K | | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HSLTTLGPLHESILKVVEEEWQQIDRQLPSVACRYPVSSIEAARILSVPKVDDEILGFISEATPAAATQASSTESCDKHLDLALCRSYEAAASALQIAAHTAFVAKSLQADISQAAQIINSDPSDAQQALRILNRTYDAASYLCDAAFDEVRS-ACAGS--STGRRYLWLKDCKISPASKNKLTVAPFKGGTLFGGEV----HKVIKKR |
9 | 7jh5A | 0.11 | 0.06 | 2.20 | 0.90 | CNFpred | | --------------------------------------------------------------------------------------------SGSELARKLLEAST-------KLQRLNIRLAEALLEA-------------------------------------IARLQELNLELVYLAVE---------------LTDPKRIRDEIKEVKDKSKEIIRRAEK------------------------EIDDAAKESEKILEEAREAISGSG---------------SELAKLLLKAIAETQDLNLRAAKAFL-------EAAAKLQE---LNIRAVELLVKLTDP------------ATIREALEHAKRRSKEIIDEAERAIRAKRESERIIEEARRLIE---------SELARELLRAHAQLQRLNLELLRELLRALAQQELNLDLLRLASETDPDEARKAIARVKRES-NAYYADAERLIREAAAAS |
10 | 6uebA | 0.07 | 0.05 | 2.07 | 0.67 | DEthreader | | AHFYSKS--------SCLERVDYAYMLMVQAVFYLLAMSRIYLDSLGGISGMSLGRF-----HIRQFS---DP--VSEGLSFWREIWLSSQ-----------------L-EDPTTLNGASPTILLKDAIRKALYDEVKVENEFREAILLSHRDFILVFPRFLSE--VGTTVP-HP-SEM-LGL-LPKSS------ISCTCGATGGGNPDTMSDTQGSIGQGLLIIGSICFL-------------------------TN-ININRPL-E--------------------------L-VSGVISYILLRLDNLYIMLRPPTTMKEGNRSILC--------------------------------------G--VVQWATGADGSGGFNSLLIKPSLLATWKYFQSV-QKQVNM-SY-DLIICDAELVFKT---V-SSS--MITLDSIMVFSNRVFNVSKPLTDPSFYPPSDPKILRHFNPITYYFRKQYLSWR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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