>P41595 (384 residues) MALSYRVSELQSTIPEHILQSTFVHVISSNWSGLQTESIPEEMKQIVEEQGNKLHWAALL ILMVIIPTIGGNTLVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEAM WPLPLVLCPAWLFLDVLFSTASIMHLCAISVDRYIAIKKPIQANQYNSRATAFIKITVVW LISIGIAIPVPIKGIETDVDNPNNITCVLTKERFGDFMLFGSLAAFFTPLAIMIVTYFLT IHALQKKAYLVKNKPPQRLTWLTVSTVFQRDETPCSSPEKVAMLDGSRKDKALPNSGDET LMRRTSTIGKKSVQTISNEQRASKVLGIVFFLFLLMWCPFFITNITLVLCDSCNQTTLQM LLEIFVWIGYVSSGVNPLVYTLFN |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MALSYRVSELQSTIPEHILQSTFVHVISSNWSGLQTESIPEEMKQIVEEQGNKLHWAALLILMVIIPTIGGNTLVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEAMWPLPLVLCPAWLFLDVLFSTASIMHLCAISVDRYIAIKKPIQANQYNSRATAFIKITVVWLISIGIAIPVPIKGIETDVDNPNNITCVLTKERFGDFMLFGSLAAFFTPLAIMIVTYFLTIHALQKKAYLVKNKPPQRLTWLTVSTVFQRDETPCSSPEKVAMLDGSRKDKALPNSGDETLMRRTSTIGKKSVQTISNEQRASKVLGIVFFLFLLMWCPFFITNITLVLCDSCNQTTLQMLLEIFVWIGYVSSGVNPLVYTLFN |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCSSSSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC |
Confidence | 986334567778888300155433566788887777888877776667762279999999999999999989994122010477787047899999999999999996099999986491026588999999999999999999999999998999634133652216679999999999999999998876344346777777651466420662799999999999999999999999999999999873013334444444444444455677654443334455555455676666555444332124567766653332358999999999828999999999715457887289999999999999857799984129 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | MALSYRVSELQSTIPEHILQSTFVHVISSNWSGLQTESIPEEMKQIVEEQGNKLHWAALLILMVIIPTIGGNTLVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEAMWPLPLVLCPAWLFLDVLFSTASIMHLCAISVDRYIAIKKPIQANQYNSRATAFIKITVVWLISIGIAIPVPIKGIETDVDNPNNITCVLTKERFGDFMLFGSLAAFFTPLAIMIVTYFLTIHALQKKAYLVKNKPPQRLTWLTVSTVFQRDETPCSSPEKVAMLDGSRKDKALPNSGDETLMRRTSTIGKKSVQTISNEQRASKVLGIVFFLFLLMWCPFFITNITLVLCDSCNQTTLQMLLEIFVWIGYVSSGVNPLVYTLFN |
Prediction | 431124245262313442122022222222233242422344344224242220000011112002203311200000001133021000000000010000100000000000000112010020000000000000000002000000000000002003033321320000000000120122011000000224354343231100133232000100121132102002301010000022213223423322233422322222222312222222122222222222223222222222222222222122432201000000111110011100000010004303220010000001120120100100020327 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCSSSSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC MALSYRVSELQSTIPEHILQSTFVHVISSNWSGLQTESIPEEMKQIVEEQGNKLHWAALLILMVIIPTIGGNTLVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEAMWPLPLVLCPAWLFLDVLFSTASIMHLCAISVDRYIAIKKPIQANQYNSRATAFIKITVVWLISIGIAIPVPIKGIETDVDNPNNITCVLTKERFGDFMLFGSLAAFFTPLAIMIVTYFLTIHALQKKAYLVKNKPPQRLTWLTVSTVFQRDETPCSSPEKVAMLDGSRKDKALPNSGDETLMRRTSTIGKKSVQTISNEQRASKVLGIVFFLFLLMWCPFFITNITLVLCDSCNQTTLQMLLEIFVWIGYVSSGVNPLVYTLFN | |||||||||||||||||||
1 | 4rnbA | 0.21 | 0.17 | 5.30 | 1.17 | DEthreader | -----------------------------------------------P--KEYEWVLIAGYIIVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATLVVDI-TETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHP------STAKRARNSIVIIWIVSCIIMIPQAI-VMECSTVFTLFTVCDERWEYPKMYHICFFLVTYMAPLCLMVLAYLQIFRKLWCRQG-IDCSFWN---------E---------SYLTGSREKKSLLVVDFISSDLSKFRENCKKRAMSFSKQIRARRKTARMLMVVLLVFAICYLPISILNVLKRFGMFAHRETVYAWFTFSHWLVYANSAANPIIYNFLS | |||||||||||||
2 | 4mbsA | 0.16 | 0.14 | 4.57 | 2.12 | SPARKS-K | ------------------------------------------PCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINYKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQ---WDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPNIIFTRSQKEG--LHYTCSSHFFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRMKKYTCTVCGYI---YNPEDGDPDNGVN----PGTDFKDIPDD---WVCPLCGVGKDQFEEVEEE-----KKRHRDVRLIFTIMIVYFLFWAPYNIVLLLNTEFFGLNNCRLDQAMQVTETLGMTHCCINPIIYAFVG | |||||||||||||
3 | 4grvA | 0.16 | 0.14 | 4.74 | 0.63 | MapAlign | ------------------------------------------SDLDVNTDIYSKVLVTAIYLALFVVGTVGNSVTLFTLARKSLQS-TVHYHLGSLALSDLLILLLAMPVELYNIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHFKAKTLMSRS-RTKKFISAIWLASALLAIPMLFTMGLQNRSHPGGLVCTPITATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTNIFEMLRIDEG----LRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKRNTNGVITKDEAEKLFNQDVDALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISTFLFDFYHYFYMLTNALAYASSAINPILYNLVS | |||||||||||||
4 | 4grvA | 0.18 | 0.16 | 5.11 | 0.34 | CEthreader | -----------------------------------------NSDLDVNTDIYSKVLVTAIYLALFVVGTVGNSVTLFTLARK-SLQSTVHYHLGSLALSDLLILLLAMPVELYNFIVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQNRSHPGGLVCTPIVDTVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKRNTNGVITKDEAEDAYGSGSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWDFYHYFYMLTNALAYASSAINPILYNLVS | |||||||||||||
5 | 6a93A | 0.51 | 0.45 | 12.89 | 1.64 | MUSTER | ------------------------------------------------THLQEKNWSALLTAVVIILTIAGNILVIMAVSLEKKLQNATNYFLMSLAIADMLLGFLVMPVSMLTILYGYRWPLPSKLCAVWIYLDVLFSTAKIWHLCAISLDRYVAIQNPIHHSRFNSRTKAFLKIIAVWTISVGISMPIPVFGLQDDSKVFKEGSCLL---ADDNFVLIGSFVSFFIPLTIMVITYFLTIKSLQKEAADLEDNWETLNDNLKVIEKADNAAQSGSGDILVGQIDDALKLANEGKVKEEQLKTTINAYIQKYGQSISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKECNEDVIGALLNVFVWIGYLSSAVNPLVYTLFN | |||||||||||||
6 | 6kp6A | 0.24 | 0.21 | 6.48 | 1.39 | HHsearch | --------------------------------------------------TVEMVFIATVTGSLSLVTVVGNILVMLSIKVNRQLQTVNNYFLFSLACADLIIGAFSMNLYTVYTIK-GYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAALMIAAAWVLSFVLWAPAIL-FWQFVVGTVPDNQCFAQFLSNPAVTFGTAIAAFYLPVVIMTVLYIHIYLASRSRVHGIDCSFWNESYLTGSDTFFDRGQKKEFQEMRFEEKNVDPIIITNETGAGDPSRLSKFRRAMSFSQMAARERKVTRTIFAILLAFILTWTPYNVMVLVNTFCQSC---IPDTVWSIGYWLCYVNSTIRPACYALCN | |||||||||||||
7 | 2ziyA | 0.21 | 0.17 | 5.44 | 3.11 | FFAS-3D | ----------------------------DNETWWYNPSVHPHWREFDQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKEL----------------------------------------------RKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGP--LEWVTPYAAQLPVMFAKASAIHNPMIYSVSH | |||||||||||||
8 | 5uenA | 0.21 | 0.18 | 5.64 | 0.95 | EigenThreader | --------------------------------------SIS----------AFQAAYIGIEVLIALVSVPGNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLAILINIG-----PQTHTCLMVACPVLILTQSSILALLAIAVDRYLRVKIPLRYKMVVTPRRAAVAIAGCWILSFVVGLTPMFGWNNAAAGSMGEPVIKFEKVISMEYMVYFFFVWVLPPLLLMVLIYLEVFYLIRKQLADLEDNWETLNDNVKDALTKMRAAALDAPEMKDFRHGFDILVGQIDDALKLANEGKIQKYLERARSTLQKELKIAKSLALILFLFALSWLPLHILNCITLFC--PSCHKPSILTYIAIFLTHGNSAMNPIVYAFRI | |||||||||||||
9 | 6a94A | 0.51 | 0.44 | 12.67 | 1.90 | CNFpred | -------------------------------------------------HLQEKNWSALLTAVVIILTIAGNILVIMAVSLEKKLQNATNYFLMSLAIADMLLGFLVMPVSMLTILYGYRWPLPSKLCAVWIYLDVLFSTAKIWHLCAISLDRYVAIQNPIHHSRFNSRTKAFLKIIAVWTISVGISMPIPVFGLQDDSKVFKEGSCLLA---DDNFVLIGSFVSFFIPLTIMVITYFLTIKSLQKEAADLEDNWETMRAAALDAGSGSGDILVGQIDDALKLANEGKVKEAQA--AAEQLKTTINAYIQKYGQSISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKSCNEDVIGALLNVFVWIGYLSSAVNPLVYTLFN | |||||||||||||
10 | 6rz6A | 0.17 | 0.14 | 4.55 | 1.17 | DEthreader | --------------------------------------R---N--CT-IENFKREFFPIVYLIIFFVGVLGNGLSIYVFLQPYKKSTSVNVFMLNLAISNLLFIST-LPFRADYYLRGSNWIFGDLACRIMSYSLYVNMYSSIYFLTVLSVVRYLAMVHPF--R-VTSIRSAWILCGIIWILIMASSIMLLD--SE-QN-GSVTSCLELKIAKLQTMNYIALVVGCLLPFFTLSICYLLIIRVLLKVEADLEDNWET-L-NDNL--KVI-----------EK-AAAQVKDLTRLVGQIAAAAEQLKTTRNAYIQKYLVSHRKALTTIIITLIIFFCFLPYHTLRTVHLTTWKLCKDRLHKALVITLALAAANACFNPLLYYFAG | |||||||||||||
|
|
Top 10 structural analogs in PDB (as identified by
TM-align)
|
|
Top 5 enzyme homologs in PDB
|
Template proteins with similar binding site:
|
References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |