Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCSSSSSSCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC VRSAFTTSTVVRMHVGDGKSSSAASRSSSLVNLWKRRGSSGETLRYKDRRLAQHKSEIECFTPKGSMGNGGRATMSSSNGKSVTWAQNEKSSRGQHLWQRLSIHINKKENPNQTAVIKPFPKSTESRGLGAGAGAGGSAGGVGATGGAGCAGAGPGGPESPDAGPKALYDVAEAEEHFPAPARPRSPSPISTLSHRAGSASRTDDDVPSLHSEPVARSSSSQGSLMEQISSVVTRFTANISELNSMMLSTAAPSPGVGAPLCSSYLIPKEIQLPTTMTTFAEIQPLPAIEVTGGAQPAAGAQAAGDAARESPAAGPEAAAAKPDLEELVALTPP |
1 | 6zywD | 0.06 | 0.05 | 2.34 | 1.10 | SPARKS-K | | VTSICWNPLYPDLFAVSLGSYDFTKQRMGLICLYSLKNTTHPEYAFNCEA--------GVMCLDFHPKSAALLAVGLYDGTVLVYDIRNKHTDP---VWQVKWNPDTSKNYNFYSISSDGRVMNWILMKNKNEEESTLIGLACGLCFDFNKFEPHIFLVGTEEGKIHKCSRAYS--GQYQETYNGHLLAVYKVKWNNFHPRTADWTVRIWDSKYTSQIICFDLSMMVV-DAVWAPYSSTVTMDKVQVYDLNVDKLNKLIVKQPKLTNLSFNYKDPILLVGDSHGGVTLVKLSPNLCKSGPEIKQTEDKKA------------------------ |
2 | 1vt4I3 | 0.11 | 0.10 | 3.81 | 1.11 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
3 | 1vt4I3 | 0.11 | 0.11 | 3.91 | 0.79 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 4rv1A | 0.10 | 0.10 | 3.58 | 0.60 | EigenThreader | | AARDLAEIASGPLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGTSTDSEVQKEAARALANIASGPTSAIKAIVDAGGVEVLVKLLTSTDEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIA---SGPTSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQRA |
5 | 4nl6A | 0.12 | 0.10 | 3.37 | 0.42 | FFAS-3D | | ------------MAMSSGGSGGGVPEQEDSV-LFRRGTGQSDDIKAYDKAVASFKHALKNGDICETSGKPKTTPKRKPAKKN--KSQKKNTAASLQQWKVGDKCIWSEDGCIYPATIASIDNREEQNLSDLLSPICEVANNIEQNAQENENESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLP----------------------PFPSGPPIIPPPPPICPDSLDDADALGSMLISWYGYYMGFRQNQKEGRCSHSL----------------------------------- |
6 | 6e5oY | 0.11 | 0.11 | 3.88 | 1.04 | SPARKS-K | | YLENGKREFYLLMNYGKKGRGTDIKKSGKWQGLLYGGGKAKVDLTFDPDDEAFGTRQGREFIW-NDLLSLETGLIKLANGRVIEKTIYNKKIGRPALFVALTFERRNIKPVNLIGVARPAVIALTDPEGCPLRIGEGYKEKQRAIQAAKEVEQRRAGGYSRKFASKSLADDMVRNSARDLFYHAVTHDAVLVFANLSRGFGRQGKRTF--------MTERQYTKMEDWLTAKLAYEGLTSKTYLSKTLAQYTSKTCSNCGFTYADMDVMLVRLKKTSD--GWATTLNNKELKAEYQITYYNRYKRQTVSGRRDEALFLLKHRPVQEQFVCLDCG |
7 | 2dg0A | 0.10 | 0.02 | 0.89 | 0.47 | CNFpred | | ---------PDSCCIDSDDNLYVAMYGQGRVLVFNKRG-----------------YPIGQILIPGRD------EGHMLRSTHPQFIP-----GTNQLIICSNDIE--MGGGSMLYTVNGF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 6ar6A | 0.04 | 0.03 | 1.55 | 0.83 | DEthreader | | --------------KRELIIIVYELVERWNLAAASDI---RISALKEIG-GM---YLDVDMLPGL-DMEAKGLISSNVKIERYEL--------FPDVKTTILS------------------FDDARAKAFE-EDLDFSIVQLQGDKIGHGKTFALGNQYVIDISCENISNIDTQIERIEEAKNSNYIDE-L--SFEDISIRFINESIFVETEKTIFSEYAN-ITEEISKIKGTIFTHEVNTLNAAFFIQSLIYNSESLSNLSAMK----------FFQPYFITLIVEP-YDDDDISSTV----------------------NIYTDEINNVNIN |
9 | 2pffB | 0.10 | 0.10 | 3.57 | 0.95 | MapAlign | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSK---- |
10 | 2atyA | 0.12 | 0.11 | 3.92 | 0.86 | MUSTER | | IAV-----TVIRYSCSGTFRLIGEKSLL-----CITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGN--------SVWCQANNM------WGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQDDVEVHTAQTQPREEQFNSTFRSVSEMHQDWLRVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTMITDFFPEDINGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGEGLHNH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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