Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CHHHHHHHHHHHHCCCCCCCCCCCCCCCSSSCCCSSSSSSSSSSSCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSSSSCCCCCHHHHHHHHHSCCCCCCSHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCC MVLLLILSVLLLKEDVRGSAQSSERRVVAHMPGDIIIGALFSVHHQPTVDKVHERKCGAVREQYGIQRVEAMLHTLERINSDPTLLPNITLGCEIRDSCWHSAVALEQSIVIGPGSSSVAIQVQNLLQLFDVKWFDDYYLKLRPETNHRNPWFQEFWQHRFQCRLEGFPQENSKYNKTCNSSLTLKTHH |
1 | 5fbhB | 0.32 | 0.24 | 7.18 | 1.00 | DEthreader | | -----------------------GPDQRAQKKGDIILGGLFPIHFGVAAKDQESVECIRYNFR-GFRWLQAMIFAIEEINSSPALLPNLTLGYRIFDTCNTVSKALEATFVVGATGSGVSTAVANLLGLFYIKSFLKLRHLNF--TNNME-VTFDLVG-----N---YSIGY-YNVYA----------- |
2 | 6n51B1 | 0.98 | 0.87 | 24.31 | 1.45 | SPARKS-K | | ----------------------SERRVVAHMPGDIIIGALFSVHHQPTVDKVHERKCGAVREQYGIQRVEAMLHTLERINSDPTLLPNITLGCEIRDSCWHSAVALEQSIEIGPGSSSVAIQVQNLLQLFNIKWFDDYYLKLRPETNHRNPWFQEFWQHRFQCRLEGFPQENSKYNKTCNSSLTLKTHH |
3 | 5fbhB2 | 0.34 | 0.28 | 8.25 | 0.92 | MapAlign | | ------------------------PDQRAQKKGDIILGGLFPIHFGVAKSRPESVECIRYN-FRGFRWLQAMIFAIEEINSSPALLPNLTLGYRIFDTCNTVSKALEATAVVGATGSGVSTAVANLLGLFYIPQFREFLKKVHPRKSVHNGFAKEFWEETFNCHLQ--------FRPLCTGDENISSV- |
4 | 1ewtA2 | 0.73 | 0.63 | 18.02 | 0.80 | CEthreader | | ------------------------QRSVARMDGDVIIGALFSVHHQPPAEKVPERKCGEIREQYGIQRVEAMFHTLDKINADPVLLPNITLGSEIRDSCWHSSVALEQSIVIGPGSSSVAIQVQNLLQLFDIPQIDDYFLKLRLDTNTRNPWFPEFWQHRFQCRLPGHLLENPNFKKVCTGNESLEENY |
5 | 1ewtA2 | 0.72 | 0.63 | 17.87 | 1.06 | MUSTER | | ------------------------QRSVARMDGDVIIGALFSVHHQPPAEKVPERKCGEIREQYGIQRVEAMFHTLDKINADPVLLPNITLGSEIRDSCWHSSVALEQSIIAGPGSSSVAIQVQNLLQLFDIPSFDDYFLKLRLDTNTRNPWFPEFWQHRFQCRLPGHLLENPNFKKVCTGNESLEENY |
6 | 6n51B | 1.00 | 0.88 | 24.74 | 2.84 | HHsearch | | ----------------------SERRVVAHMPGDIIIGALFSVHHQPTVDKVHERKCGAVREQYGIQRVEAMLHTLERINSDPTLLPNITLGCEIRDSCWHSAVALEQSIVIGPGSSSVAIQVQNLLQLFDVKWFDDYYLKLRPETNHRNPWFQEFWQHRFQCRLEGFPQENSKYNKTCNSSLTLKTHH |
7 | 1ewtA2 | 0.71 | 0.62 | 17.59 | 1.45 | FFAS-3D | | ------------------------QRSVARMDGDVIIGALFSVHHQPPAEKVPERKCGEIREQYGIQRVEAMFHTLDKINADPVLLPNITLGSEIRDSCWHSSVALEQSGVIGPGSSSVAIQVQNLLPSPEVRSFDDYFLKLRLDTNTRNPWFPEFWQHRFQCRLPGHLLENPNFKKVCTGNESLEENY |
8 | 6n51B1 | 0.79 | 0.68 | 19.29 | 0.95 | EigenThreader | | --------------------SERRVVAH--MPGDIIIGALFSVHHQPTVDKVHERKCGAVREQYGIQRVEAMLHTLERINSDPTLLPNITLGCEIRDSCWHSAVALEQSGVIGPGSSSVAIQVQNLLQLFNSPDVKWFDDYYLKLRPETNHFWQHRFQ----CRLEGFPQENSKYNKTCNSSLTLKTHH |
9 | 3lmkA | 0.79 | 0.57 | 16.00 | 1.42 | CNFpred | | ------------------------RRVVAHMPGDIIIGALFSVHHQPTVDKVHERKCGAVREQYGIQRVEAMLHTLERINSDPTLLPNITLGCEIRDSCWHSAVALEQSGVIGPGSSSVAIQVQNLLQLFNIPQIA-YFMRVVPSDAQQARAMVDIVKRY----------------------------- |
10 | 7dttA | 0.32 | 0.25 | 7.48 | 1.00 | DEthreader | | --------------------Y--GPDQRAQKKGDIILGGLFPIHFGVAAKDQESVECIRYNFR-GFRWLQAMIFAIEEINSSPALLPNLTLGYRIFDTCNTVSKALEATFVVGATGSGVSTAVANLLGLFYIKSFLKLRHLNF--TNNMG--VT-D---DLVGN---YSIIVGYYNVYA---------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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