Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| SS Seq | CCCCCHHHHHHHHHHHHHHHHHCCCSCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCSSSHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCC MPSPRPVLLRGARAALLLLLPPRLLARPSLLLRRSLSAASCPPISLPAAASRSSMDGAGAEEVLAPLRLAVRQQGDLVRKLKEDKAPQVDVDKAVAELKARKRVLEAKELALFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPV |
1 | 5l7dA3 | 0.09 | 0.07 | 2.63 | 0.83 | DEthreader | | AAFGVTTNCFFGVALMAFVLPFVLTVAILAVAQVD-G-D-S-V-SGI--CFVGYKNYRYRAGVLAPIGLVLIVGGYFLIRGVMTLNMLRLGIFGFLAFGFVLITFSCHFYDNQAE-------WERSFRDYVL-CQANVT-IGLPTKQPIPD--CE--IK-NRPS------------------------ |
2 | 2zt6A1 | 0.99 | 0.40 | 11.32 | 1.05 | SPARKS-K | | ---------------------------------------------------------------------------------------------------------------DFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPV |
3 | 5h5mA | 0.11 | 0.11 | 3.81 | 0.74 | MapAlign | | -------DLINEIDTFQNRIEIDPAHYRRGTDRPDLEGHCERIVSGSASIADAESTRENRKQKIVAECNNLRQALQELLTEYESTGRRDDIPLGIAEVHKRTKDLRRHLRRALLLAAKEGHTRSMFANEIVSVARLSCQLS-SDVESVSVIQHTAAQLEKL-APQVAQAAI---LLCHQPAQNMETYK |
4 | 2zt6A | 0.52 | 0.44 | 12.62 | 0.89 | CEthreader | | --------------------IVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDF----------GPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPV |
5 | 2zt6A | 0.55 | 0.46 | 13.19 | 0.69 | MUSTER | | --------------------IVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYD----GPVGCALKNNIIQTWRQHFIQ-----EEQILEIDC--MLTPEPVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPV |
6 | 2zt6A1 | 0.99 | 0.40 | 11.32 | 3.58 | HHsearch | | ---------------------------------------------------------------------------------------------------------------DFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPV |
7 | 2zt6A1 | 0.99 | 0.40 | 11.32 | 1.27 | FFAS-3D | | ---------------------------------------------------------------------------------------------------------------DFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPV |
8 | 2zt6A | 0.47 | 0.37 | 10.69 | 1.05 | EigenThreader | | ------------------IVDRAKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQPVLKTSG-------HVDKF-----------------ADFMVKDVKNGEFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPV |
9 | 4kqeA | 0.56 | 0.45 | 13.01 | 1.05 | CNFpred | | ------------------------AKMGDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQTWRQHF--------IQEEQILEIDC-----TMLTPEPVLKTSGFADFMVKDVKNGECFRADHLLKAHLQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPV |
10 | 4d0nB | 0.12 | 0.09 | 3.22 | 0.83 | DEthreader | | -------------L--TEFHHVRTLKIMSGSQVEPCLDES--ENERLKKTYGKFCQHNCILLVTQRITKYPVLFQRILQCT--K-DNEVEQEDLAQSLSLVKDVIGAVDSKVAS---------YEKKVRLNEIYTKTDS-K-SIMRMMFAKEDLK-RK--KLVRDAVLLILVFLQE-Q----S-SW-I |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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