Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| SS Seq | CCCSSSSSCCHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSSHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCSSSSSSSCCCCCSSSSSSCCCCCHHHHHHHHHSCCCCCCCCCCSSSCCSSSSCCCSCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCCCCCCSSSCCCHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC MKHINLSFAACGFLGIYHLGAASALCRHGKKLVKDVKAFAGASAGSLVASVLLTAPEKIEECNQFTYKFAEEIRRQSFGAVTPGYDFMARLRSGMESILPPSAHELAQNRLHVSITNAKTRENHLVSTFSSREDLIKVLLASSFVPIYAGLKLVEYKGQKWVDGGLTNALPILPVGRTVTISPFSGRLDISPQDKGQLDLYVNIAKQDIMLSLANLVRLNQALFPPSKRKMESLYQCGFDDTVKFLLKENWFE |
1 | 1oxwC | 0.13 | 0.13 | 4.49 | 1.33 | DEthreader | | GEVTVLSIDGGGIRGIIPATILEFLEGQLQALADYFDVIGGTSTGGLLTAISTPPFAAAKEIVPFYFEHGPQIF-NPSGQILGPKYDGKYL-QVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSLPEDAKYDISYSTAAAPTYF-PPHYFVYEFNLVDGAVTVADPALSATLLLSLGTGTTTYTAEAATWT-AV--HW-LVI-QKTDAASSYTDRQNALTTANELLVQVGENLLKKYEEALKRFAKLS |
2 | 5fquA | 0.17 | 0.15 | 4.82 | 1.65 | SPARKS-K | | RPKIGLVLSGGAARGLAHIGVLKALDEQGIQ----IDAIAGTS-GAVVGGLYASGYT-PAELERIALLGVIQGQNLAV------------LESLLVHTSDNRDFDKLAIPFRAVSTDIATGEKVVFR----KGHLPQAIRAS-SIPAVFA--PVEIR--LLVDGG-VDNIPVDVARVVIVVDIGNPLRDRKDLSTVLDVNQ---SITLTRKNSEAQLATLDVLIQPDFGRVPQLIDAGYRATTVLAARLAEL- |
3 | 1oxwC | 0.15 | 0.14 | 4.81 | 1.58 | MapAlign | | -EVTVLSIDGGGIRGIIPATILEFLEGQDARLADYFDVIGGTSTGGLLTA-ISTPFAAAKEIVPFYFEHGPQI-FNPSGQILGPKYDGKYL-QVLQEKLGETRVHQALTEVVISSFDIKTNKPVIFTKSNLLDAKYDISYSTAAAP--TYFPPHYFYEFNLVDGAVAVADPALLSKLLLSLGTGTTSEFDKTYTAKEAATWTAVHWLVIQKTDAASSYTDLRVQEDASEANELLVQVGENLLEEALKR--FAK |
4 | 4akfA | 0.18 | 0.18 | 5.90 | 1.39 | CEthreader | | PEHKGLVLSGGGAKGISYLGMIQALQERG--KIKNLTHVSGASAGAMTASILAVGMDIKDIKKLIEGLITKLLDNSGVGFRARGDRFRNILDVIYMMQMPRLTLGDLIKNLSVVVTNQTKHELERYSETTPQQSIAQVVQWSGAHPVLFV-PGRNAKGEYIADGGILDNMPEIEGLEVLCVKAEAGTAFEDRHATSSVLNREKVYYNIDNMIYINTGEVTTTNTSPTPEQRARAVKNGYDQTMQLLDSHKQTF |
5 | 5fquA | 0.19 | 0.17 | 5.59 | 1.40 | MUSTER | | RPKIGLVLSGGAARGLAHIGVLKALDEQGIQ----IDAIAGTS-GAVVGGLYASGYT-PAELERIALEDWQPLGVIQGQ-------NLAVLESLLVHTSDNRDFDKLAIPFRAVSTDIATGEKVVFR----KGHLPQAIRAS-SIPAV--FAPVEIR--LLVDGG-VDNIPVDVVDVVIVVDIGNPLRD--RKDLSTVLDVNQSITLTRKNSEAQLATLGDVLIQPDFGRVPQLIDAGYRATTVLAARLAEL- |
6 | 4akfA | 0.19 | 0.18 | 5.89 | 4.08 | HHsearch | | PEHKGLVLSGGGAKGISYLGMIQALQERGK--IKNLTHVSGASAGAMTASILAVGMD-IKDIKKLIEGLDTKLLDNSGVRLSAGIV-INNVDDIIDKAILPEENKHLIKNLSVVVTNQTKHELERYSEDTPQQSIAQVVQWSGAHPVL--FVPGRAKGEYIADGGILDNMPEIEGEEVLCVKAEAGTAFEDKQAMEAISWFKARMDSLVEATIGGKWLYYDNMTSPTPEQRARAVKNGYDQTMQLLDSHKQTF |
7 | 5fquA | 0.18 | 0.16 | 5.14 | 1.58 | FFAS-3D | | RPKIGLVLSGGAARGLAHIGVLKALDEQGIQID----AIAGTSGAVVGGLYASGYT---------PAELERIALEDWQPLGVIQGQNLAVLESLLVHTSDNRDFDKLAIPFRAVSTDIATGEKVVFRK----GHLPQAIRASSIPA-----VFAPVEIRLLVDGGV-DNIPVDVAVDVVIVVDIGNPLRDRKDLSTVLD-----VNQSITLTRKNSEAQLALIQPPDFGRVPQLIDAGYRATTVLAAR----- |
8 | 1oxwC | 0.12 | 0.11 | 3.81 | 1.53 | EigenThreader | | GEVTVLSIDGGGIRGIIPATILEFLEGQLQEDADYFDVIGGTSTGGLLTA--ISPFAAAKEIVPFYFEHGPQIF---NPSGQILGPK----YDLQEKLGETRV---HQALTVISSFDIKTNKPIFTKSSPELDAKYDISYSTAAAP--TYFPPHYFTSNNLVDGAVATVADPNYKKLLLSLGTGTTSEFDKTYTTAVHWL-----VIQKTDAASSYLSTAFQALDSKNNTTTELVQVGENLLKKEEALKRFAK |
9 | 5fquA | 0.19 | 0.17 | 5.47 | 1.45 | CNFpred | | RPKIGLVLSGGAARGLAHIGVLKALDEQGI----QIDAIAGTSMGAVVGGLYASGY-TPAELERIALEMD------------LGVIQGQNLAMVLESLLV-RDFDKLAIPFRAVSTDIATGEKVVFRK----GHLPQAIRASMSIPAVF--APVEI--RLLVDGGMVDNIPVDVARDVVIVVDIGNPLRDRKDLSTVLDVMNQSITLMTRKNSEAQLATLDVLIQPP-GRVPQLIDAGYRATTVLAARLA--- |
10 | 6aunA | 0.13 | 0.12 | 4.10 | 1.33 | DEthreader | | IHDHLLCLDGGGVKGLVIIQLLIAIEKSGVATKDLFDWVAGTSTGGILALAILHSK-SMAYMRGVYFRMKDEVF-RGSR---PYE--SGPLEEFLKREFGHTKMDVKKPKVMLTGTLSQPAELHLFRNYDADQLVWRAARSSGAAPTYF-RPNGR-----FLDGGLLANNPTDAILIVVSLGTGRSVVKELG----------K--MVVDCCTD-PDGRVRNQLDIENDAVLVNALWETEVYIYREFQKLVQLL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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