Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Download alignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
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| SS Seq | CCCCCCCCCCCCSCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHSCCCCCSSSCCCHHHHHHHHHHHHHHHHHHHHHCCCSSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHSSSSSCCCCCSCCSSSCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCSSSSCCCCCCCCCCCCC TSGSSDKVYAHQMVRTDSREQKLDAFLQPLSKPLSSQPQAIVTEDKTDISSGRARQQDEEMLELPAPAEVAAKNQSLEGDTTKGTSEMSEKRGPTSSNPRKRHREDSDVEMVEDDSRKEMTAACTPRRRIINLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSIRKQYISEESTLSGQQSEVPGSIPNSWKWTVEHIVYKALRSHILPPKHFTEDGNILQLANLPDLYKVFERC |
1 | 4e4wA | 0.32 | 0.18 | 5.47 | 0.83 | DEthreader | | ----------------------------------------------------------------------------------------------------------------------------------VNLTSIKKLREKVDDSIHRELTDIFANLNYVGVVDERLAAIQHDLKLFLIDYGSVCYELFYQIGLTDFANFGKINLDIVLYNKEIISKIWDMSSM-VDWEDEQECLDGILREIALLYIPDMVPKV--D-T---SDALKFIRKEHISSLLEHVLFPCIKRRFLAPRHIL--KDVVEIANLPDLYKVFERC |
2 | 3rbnA | 0.90 | 0.54 | 15.16 | 1.68 | SPARKS-K | | --------------------------------------------------------------------------------------------------------------GRENLYFRKETAACTPRRRIINLTSVLSLQEEINEQGHEVLREL-HNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRLDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECA-FYSIRKQYIS-----------EESTLSNSWKWTVEHIVYKALRSHILPPKHFTEDGNILQLANLPDLYK----- |
3 | 4e4wA | 0.31 | 0.17 | 5.22 | 1.76 | MapAlign | | ----------------------------------------------------------------------------------------------------------------------------------VNLTSIKKLREKVDDSIHRELTDIFANLNYVGVVDERLAAIQHDLKLFLIDYGSVCYELFYQIGLTDFANFGIVLYNLLSEFDELKEKIISKIWDEVDWEDEQECLDGILREIALLYIPDMVVDTSDASLSEDEKAQFINRKEHISSLLEHVLFPCIKRRFLAPRHIL--KDVVEIANLPDL------- |
4 | 4e4wA | 0.36 | 0.21 | 6.34 | 1.48 | CEthreader | | ----------------------------------------------------------------------------------------------------------------------------------VNLTSIKKLREKVDDSIHRELTDIFANLNYVGVVDERLAAIQHDLKLFLIDYGSVCYELFYQIGLTDFANFGKINLQSYIPSLVKLPFFIYRLGKEVDWEDEQECLDGILREIALLYIPDMVPKVDTSDASLSEKAQFINRKEHISSLLEHVLFPCIKRRFLAPRHIL--KDVVEIANLPDLYKVFERC |
5 | 3rbnA | 0.90 | 0.54 | 15.16 | 1.08 | MUSTER | | --------------------------------------------------------------------------------------------------------------GRENLYFRKETAACTPRRRIINLTSVLSLQEEINEQGHEVLRELHN-HSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRLSNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAFY-SIRKQYISEESTLSN-----------SWKWTVEHIVYKALRSHILPPKHFTEDGNILQLANLPDLYK----- |
6 | 4e4wA | 0.36 | 0.21 | 6.25 | 7.86 | HHsearch | | ----------------------------------------------------------------------------------------------------------------------------------VNLTSIKKLREKVDDSIHRELTDIFANLNYVGVVDEELAAIQHDLKLFLIDYGSVCYELFYQIGLTDFANFGKINLQSYIPSLVKLPFFIYRLGKEVDWEDEQECLDGIL-REALLYIPDMVPKVDTSDASLDEKAQFINRKEHISSLLEHVLFPCIKRRFLAPRHILK--DVVEIANLPDLYKVFERC |
7 | 4e4wA | 0.38 | 0.22 | 6.60 | 1.87 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------------------------VNLTSIKKLREKVDDSIHRELTDIFANLNYVGVVDEELAAIQHDLKLFLIDYGSVCYELFYQIGLTDFANFLPLLLKGYIPSLVKLPFFIYRLGKEVDWEDEQECLDGILREIALLYIPDMVPKVDTSDASLSEDAQFINRKEHISSLLEHVLFPCIKRRFLAPRHILKD--VVEIANLPDLYKVFERC |
8 | 4e4wA | 0.20 | 0.12 | 3.71 | 1.00 | EigenThreader | | ----------------------------------------------------------------------------------------------------------------------------------VNLTSIKKLREKVDDSIHRELTDIFANLNYVGVVDEELAAIQHDLKLFLIDYGSVCYELFYQIGLTDFDNDLKSLLLKGYIPSLVKLPFFIYRLGKE---VDWEDEQECLDGILREIALLYIPDMVPKVDTSDASLSFINRKEHISSLLEHVLFPCIKRRFLAPRHIL-KDVVEIANLPDLYKVFERC- |
9 | 3rbnA | 0.98 | 0.57 | 16.08 | 2.13 | CNFpred | | --------------------------------------------------------------------------------------------------------------------RKEMTAACTPRRRIINLTSVLSLQEEINEQGHEVLREMLHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRLSNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSIRKQYISEESTLS-----------NSWKWTVEHIVYKALRSHILPPKHFTEDGNILQLANLPDLYK----- |
10 | 3rbnA | 0.81 | 0.45 | 12.66 | 0.83 | DEthreader | | ------------------R-E---CT---------------------------------------------------------------------------------------------------PRRRIINLTSVLSLQEEINEQGHEVLRE-LHNHSFVGCVNPQWALAQHQTKLYLLNTTKLSEELFYQILIYDFANFGVLRLPAPLFDEIVEFLKKKAEL--VNWDEEKECFESLSKECAF-YSIRKQYI------------SE-ESTNSWKWTVEHIVYKALRSHILPPKHFTEDGNILQLANLPD-LY--K-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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