>P40337 (213 residues) MPRRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPR PVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFR DAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDI VRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD |
Sequence |
20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | MPRRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSCCCCCSSSSSSCCCCCSSSCCCCCCCCSSSSCCCCCCSSSSSSCCCCCSSSSCCSSSSSCCCCCCCCCSSSSSCCCCHCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC |
Confidence | 987667866567886668877888766676667877679888874446665444444558876568897179999995899907899984899466502148991698426788418998468985266546145642678888715877506631399999999999727444442576489999998564468899999999987654059 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | MPRRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD |
Prediction | 655547647556444754434652576434764467443465645644465644555544443414644340201010327330200000244544434404554424141243010102135354312045440120315474421303032203102420042025104573155060153025205723524431450255336444478 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSCCCCCSSSSSSCCCCCSSSCCCCCCCCSSSSCCCCCCSSSSSSCCCCCSSSSCCSSSSSCCCCCCCCCSSSSSCCCCHCHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC MPRRAENWDEAEVGAEEAGVEEYGPEEDGGEESGAEESGPEESGPEELGAEEEMEAGRPRPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQRMGD | |||||||||||||||||||
1 | 1lm8V | 0.93 | 0.61 | 17.14 | 1.00 | DEthreader | -----------------------------------------------------------RPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLE-DHPNVQKD-LE------------ | |||||||||||||
2 | 1lm8V | 1.00 | 0.70 | 19.72 | 3.17 | SPARKS-K | -----------------------------------------------------------RPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQ---- | |||||||||||||
3 | 1lm8V | 1.00 | 0.69 | 19.32 | 1.50 | MapAlign | -----------------------------------------------------------RPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERI------- | |||||||||||||
4 | 1lm8V | 1.00 | 0.70 | 19.72 | 1.66 | CEthreader | -----------------------------------------------------------RPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQ---- | |||||||||||||
5 | 1lm8V | 1.00 | 0.70 | 19.72 | 2.19 | MUSTER | -----------------------------------------------------------RPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQ---- | |||||||||||||
6 | 1lm8V | 1.00 | 0.70 | 19.72 | 7.00 | HHsearch | -----------------------------------------------------------RPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQ---- | |||||||||||||
7 | 1lm8V | 1.00 | 0.70 | 19.72 | 2.43 | FFAS-3D | -----------------------------------------------------------RPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIAHQ---- | |||||||||||||
8 | 1lm8V | 0.99 | 0.69 | 19.46 | 1.25 | EigenThreader | -----------------------------------------------------------RPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIA-----H | |||||||||||||
9 | 4wqoA | 1.00 | 0.69 | 19.46 | 2.42 | CNFpred | -----------------------------------------------------------RPVLRSVNSREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTHDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPENYRRLDIVRSLYEDLEDHPNVQKDLERLTQERIA------ | |||||||||||||
10 | 2j5wA | 0.08 | 0.06 | 2.21 | 0.67 | DEthreader | ----DTEHSNIYLQ-NGPDRI-DENFSWYL---GMGNDVHAAFFH--QALTNNYNADRGERRDHADVG-DKVKIIFKNMATRPYSIHAHGVQ--SSTVTPTLPGETLTYVWKIPSWAYYSTVDQVDLGLI---GPLIVC----------------LV-FDEN-ES--L---------DDEE-IE--KGNEID----PG-TY------------ | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |