Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640 660
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SS Seq | CHHHHHHHHHHHHHCCCCCSSCCCCCSSSCCCCCCCCSSSSSSSCCCCCCSSSSSCCCCCCCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSCCCCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCSSSSSSSSCCCSSSSSSCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCSSSSSSSCCCCCCCCCCHHHHHHHHHHHCCSSSSSCCCCCCCCCCCHHHHHHHHCCCCCCSSSSSSSSCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCSSSSSCCCCCCCCCCSSSSSCCCCCCSSSSSSCCCCCCCCCCSSSSSSSSCCCCCCCSSSSSCCCCCCCCCCSSSSSSSSCCCCCCCCCCSSSSCCCCCCCCCCCSSSSSCCCCCCCCCCCSSSSCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCSSSSCCCCCCCCCCCCCSSSCCCCCCCCCCCCSSSSCCCCSSSSSC MWLFHTLLCIASLALLAAFNVDVARPWLTPKGGAPFVLSSLLHQDPSTNQTWLLVTSPRTKRTPGPLHRCSLVQDEILCHPVEHVPIPKGRHRGVTVVRSHHGVLICIQVLVRRPHSLSSELTGTCSLLGPDLRPQAQANFFDLENLLDPDARVDTGDCYSNKEGGGEDDVNTARQRRALEKEEEEDKEEEEDEEEEEAGTEIAIILDGSGSIDPPDFQRAKDFISNMMRNFYEKCFECNFALVQYGGVIQTEFDLRDSQDVMASLARVQNITQVGSVTKTASAMQHVLDSIFTSSHGSRRKASKVMVVLTDGGIFEDPLNLTTVINSPKMQGVERFAIGVGEEFKSARTARELNLIASDPDETHAFKVTNYMALDGLLSKLRYNIISMEGTVGDALHYQLAQIGFSAQILDERQVLLGAVGAFDWSGGALLYDTRSRRGRFLNQTAAAAADAEAAQYSYLGYAVAVLHKTCSLSYIAGAPRYKHHGAVFELQKEGREASFLPVLEGEQMGSYFGSELCPVDIDMDGSTDFLLVAAPFYHVHGEEGRVYVYRLSEQDGSFSLARILSGHPGFTNARFGFAMAAMGDLSQDKLTDVAIGAPLEGFGADDGASFGSVYIYNGHWDGLSASPSQRIRASTVAPGLQYFGMSMAGGFDISGDGLADITVGTLGQAVVFRS |
1 | 3v4pA | 0.29 | 0.17 | 5.22 | 0.83 | DEthreader | | ------------------YNVDTESALLYQGPHNTFGYSVVLHSH-G-ANRWLLVGAPTANINPGAIYRCRIGKNGQTCEQLQLGPGERDQWLGVTLSRQPGSIVTCGHRWKNIIKNENKLPTGGCYGVPPDLRTLSKRIAP-CYQ--D--------Y-V-KK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FGENFASCQAGISSFYTKD-LIVMGAPGSSYWTGSLFVYNITTNKYK-AFLDKQNQ----VKFGSYLGYSVGAGHFQHTTEVVGGAPQHEQIGKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNA-DGFSDLLVGAPMQSTIREEGRVFVYINSGSGAVMNAMTNLVGSDKY-AARFGESIVNLGDIDNDGFEDVAIGAPQEDDL------QGAIYIYNGRADGISSTFSQRIEGLQISKSLSMFGQSISGQIDADNGYVDVAVGAFRDSAVLLRT |
2 | 5e6rA | 0.32 | 0.27 | 8.19 | 3.67 | SPARKS-K | | ------------------YNLDVRGARSFSRAGRHFGYRVLQVGN------GVIVGAPGEGNSTGSLYQCQS--GTGHCLPVTLRGSYTSKYLGMTLATDPTSILACDPGLSRTCDQ-NTYLSGLCYLFRQNLQGP------------MLQGRPGFQECIKG-------------------------------------NVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNT--SYQFAAVQFSTSYKTEFDFSDYVKWKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGE-ATDSGNID------AAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFTELQKKI------DLTSFNMELSSSGISADLSR-GHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNE----PLTPEVRAGYLGYTVTWLPSRKTSLLASGAPRYQHMGRVLLFQEPQGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRR--QLGFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--------GAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSS |
3 | 3k71G | 0.34 | 0.30 | 8.85 | 1.42 | MapAlign | | ------------------FNLDTEELTAFRVDSAGFGDSVVQY-----ANSWVVVGAPQKANQTGGLYQCGY--STGACEPIGLQPEAVNMSLGLSLASTPSQLLACGPTVHHECGRNMY-LTGLCFLLGP--TQLTQRLPVSRQECP-------------------------------------------------RQEQDIVFLIDGSGSISSRNFATMMNFVRAVISQF--QRPSTQFSLMQFSNKFQTHFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFAIEGTETTSSSFELAQEGFSAVFTP-DGPVLGAVGSFTWSGGAFLYPP-NMSPTFINMSQ----ENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCALYGEQ--GHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEE------ENRGAVYLFHGVGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLLRT |
4 | 5e6rA | 0.32 | 0.27 | 8.11 | 0.80 | CEthreader | | ------------------YNLDVRGARSFSPAGRHFGYRVLQVGN------GVIVGAPGEGNSTGSLYQCQSG--TGHCLPVTLGSNYTSKYLGMTLATTDGSILACDPGLSRTC-DQNTYLSGLCYLFRQNLQGPMLQGRPGF-------------------------------------------------QECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNT--SYQFAAVQFSTSYKTEFDFSDYVKWKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDS-------GNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFTELQKKID------LTSFNMELSSSGISADLSR-GHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPL----TPEVRAGYLGYTVTWLPSQKTSLLASGAPRYQHMGRVLLFQEPQGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQL--GFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEEQ--------GAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSS |
5 | 3k71G | 0.34 | 0.29 | 8.77 | 2.65 | MUSTER | | ------------------FNLDTEELTAFRVDSAGFGDSVVQYANS-----WVVVGAPQKITQTGGLYQCGY--STGACEPIGLQPEAVNMSLGLSLASTTSQLLACGPTV-HHECGRNMYLTGLCFLLGP-TQLTQRLPV-------------SRQECPRQE-------------------------------------QDIVFLIDGSGSISSRNFATMMNFVRAVISQFQRP--STQFSLMQFSNKFQTHFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFAIEGTETSSFELEMAQEGFSAVFT-PDGPVLGAVGSFTWSGGAFLYPPNMSPTFI-----NMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEEN------RGAVYLFHGVLPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLLRT |
6 | 3k71G | 0.34 | 0.30 | 8.85 | 5.90 | HHsearch | | ------------------FNLDTEELTAFRVDSAGFGDSVVQYANS-----WVVVGAPQKITQTGGLYQCGYS--TGACEPIGLPPEAVNMSLGLSLASTTSSLLACGPTVHHEC-GRNMYLTGLCFLLGP-TQLTQRL--PV-----------SRQECPR-------------------------------------QEQDIVFLIDGSGSISSRNFATMMNFVRAVISQFQRP--STQFSLMQFSNKFQTHFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFAIEGTETSSFELEMAQEGFSAVFT-PDGPVLGAVGSFTWSGGAFLYPPNM-SPTFINMSQ----ENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEE------NRGAVYLFHGVLPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLLRT |
7 | 3k71G | 0.34 | 0.29 | 8.74 | 3.87 | FFAS-3D | | ------------------FNLDTEELTAFRVDSAGFGDSVVQY-----ANSWVVVGAPQKANQTGGLYQCGYSTGACEPIGLQVPPEAVNMSLGLSLASTTSQLLACGPTVHH-ECGRNMYLTGLCFLLGPTQLTQRLP---------------------------------------------------VSRQECPRQEQDIVFLIDGSGSISSRNFATMMNFVRAVISQF--QRPSTQFSLMQFSNKFQTHFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFAIEGTESSSFELEMAQEGFSAVFTPDG-PVLGAVGSFTWSGGAFLYPPNMSP-----TFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEE------ENRGAVYLFHGVGPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLLRT |
8 | 5e6rA | 0.20 | 0.17 | 5.38 | 1.43 | EigenThreader | | ------------------YNLDVRGARSFSRAGRHFGYRVLQVG-----NGVIVGAPGEG--NSTGSLYGTG----HCLPVTLRGSNYTSKYLGMTLATDGSILACDPGLSRTCQ----NYLSGLCYLFRQNLQGPMLQGRPGF-------------------------------------------------QECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNT--SYQFAAVQFSTSYKTEFDFSDYVKWKDPDALLKHVKHMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNID------A--AKDIIRYIIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFTELQKKIDLTSFNME--------LSSSGISADLSRGHAVVGAVGAKDWAGGFLDLK-ADLQDDTFIGNEP--LTP--EVRAGYLGYTVTWLPSTSLLASGAPRYQHMGRVLLFQEPQGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRFIYQRRQL--GFEEVSELQGDPGYPLGRFGEAITALTDINGDGLVDVAVGAPLEE---------QGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRGVKDLEGDG--LADVAVGAES-QMIVLSS |
9 | 4nehA | 0.34 | 0.30 | 8.85 | 6.33 | CNFpred | | ------------------FNLDTEELTAFRVDSAGFGDSVVQYA-----NSWVVVGAPQKIDQTGGLYQCGYS--TGACEPIGLQVPPVNMSLGLSLASTPSQLLACGPTVHHECG-RNMYLTGLCFLLGP-TQLTQRLPV-------------SRQECPRQ-------------------------------------EQDIVFLIDGSGSISSRNFATMMNFVRAVISQFQR--PSTQFSLMQFSNKFQTHFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIFAIEGTESSSFELEMAQEGFSAVFTP-DGPVLGAVGSFTWSGGAFLYPP-NMDPTFINMSQEN----VDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLYGEQGHPWGRFGAALTVLGDVNGDKLTDVVIGAPGEEE------NRGAVYLFHGVLPSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLLRT |
10 | 3k71G | 0.33 | 0.19 | 5.82 | 0.83 | DEthreader | | ------------------FNLDTEELTAFRVDSAGFGDSVVQYAN-----SWVVVGAPQKITQTGGLYQCGYS--TGACEPIGLQVPAVNMSLLSLASTTSPSQLLACGPTVHHECGRNMYLTGLCFLLG-P-TQLTQRLPVS------------RQECPRQE-----------PS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSSSFELEMAQEGFSAVFTPD-GPVLGAVGSFTWSGGAFLYPPNMSP-TFINMSQEN----VDMRDSYLGYSTELALWKGVQSLVLGAPRYQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWDAVLYGEQGHP-WGRFGAALTVLGDVNGDKLTDVVIGAPGEE-E-----NRGAVYLFHGVLGSISPSHSQRIAGSQLSSRLQYFGQALSGGQDLTQDGLVDLAVGARGQVLLLRT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|