Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520
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| SS Seq | CCCCCCCCCCSSCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCSSCCC TTSVYHSPGRNVLGTESRDGPGWAQWLLPPVVWLLNGLLVLVSLVLLFVYGEPVTRPHSGPAVYFWRHRKQADLDLARGDFAQAAQQLWLALRALGRPLPTSHLDLACSLLWNLIRHLLQRLWVGRWLAGRAGGLQQDCALRVDASASARDAALVYHKLHQLHTMGKHTGGHLTATNLALSALNLAECAGDAVSVATLAEIYVAAALRVKTSLPRALHFLTRFFLSSARQACLAYSFSISSSMATTTGVDPVAKWWASLTAVVIHWLRRDEEAAERLCPLVEHLPRVLQESERPLPRAALHSFKAARALLGCAKAESGPASLTICEKASGYLQDSLATTPASSSIDKAVQLFLCDLLLVVRTSLWRQQQPPAPAPAAQGTSSRPQASALELRGFQRDLSSLRRLAQSFRPAMRRVFLHEATARLMAGASPTRTHQLLDRSLRRRAGPGGKGGAVAELEPRPTRREHAEALLLASCYLPPGFLSAPGQRVGMLAEAARTLEKLGDRRLLHDCQQMLMRLGGGTTVTSS |
1 | 4ui9O | 0.12 | 0.10 | 3.68 | 1.31 | FFAS-3D | | ---------HMILAYSKLSFSQVFKLYTALQQYFQQAEFFLSQQASLLKNDETKALTPASLQKELNNHYLSYLNNLRVQDVFSSTHSLLHYFDRLILTGAESYAALNLAALHLALQEAIRLQHCLSWLYVLGQKRSDSYVLLEHSVKKAVPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKH----SLSELIDISIAQKTAIWRLYGR--STMALQQAQMLLSM-----------NSLEQQNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERF--PPNSQHAQLWMLCDQKIQFDRAMNDGKYHLADSLVTGISEAHKLLQKLLVHCQKLKNTEMVISVLL------SVAELYWRSSS----------------PTIALPMLLQALALSKE--YRLQYLASETVLNLAFAQLILG-IPEQALSLLHMAIEPILADGA-------------ILDKGRAMFLVAKNLNEAKVDCKERIRDVVYFQARLYHTLGKTQERNRCAMLFRQLHQ------- |
2 | 1hz4A | 0.13 | 0.09 | 2.98 | 1.01 | SPARKS-K | | -----------------------------------------------------EIKDIREDTMHAEFNALRAQVAINDGNPDEAERLAKLALEEL----PPGWFYSRIVATSVLGEVLHCKLTRSLALMQQTEQMARQHD-------VWHYALWSLIQQSEILFAQGF---LQTAWETQEKAFQLINELEQL---PMHEFLVRIRAQLLWAWAR---LDEAEASARSGIEVL--------------SSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLG---NGKYHSDWISNANKVRVIYWQMTGDK----------AAAANWLRHTAKPEFANNHFLQGQWRNIARAQILL------------GE----------------FEPAEIVLEELNENARSLMSDLNRNLLLLNQLYWQAGR-KSDAQRVLLDALKLANRTGF-----------------ISHFVIEG------------------EAMAQQLRQLIPELEQHRAQRILREIN-------- |
3 | 4ui9O | 0.14 | 0.11 | 3.83 | 1.42 | CNFpred | | -----------------------EAHYLSYLNNLRDVFSSTHSLLHYFDRL-KSNGEEGYGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQES--NDHVCLQHCLSWLYVLGQ-SYVLLEHSVKKAV--------------GLPYLASLGIQSLVQQRAFAG--KTANKLMDALKDSDLLHWKH----LSELIDISIAQKTAIWRLYG---RSTMALQQAQMLLSMNSL------------QQNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERPPNSQ--HAQLWMLCDQKIQFDRAMNDG----KYHLADSLVTGITALNSIEGVYRKAHKLLQKLLVHCVISVLLSVAELYWRSSSP-----------------TIALPMLLQALALSKEYR--LQYLASETVLNLAFAQLIL-GIPEQALSLLHMAIEPILAD-------------GAILDKGRAMFLVAKCQVA-KAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLGKTQE |
4 | 5o09C | 0.10 | 0.10 | 3.60 | 0.54 | CEthreader | | YYCEALETFQRLDGEQSARVASVYNNLGVLYYSHMDVDRAQVMHERALAIRQNLHEGQMDPADLSQTFINLGAVYKAAGDFQKAEACVDRAKRIRAAMNGDTALERQIASASRSVEEARRLAYHDPIRVGALVEQISVLADLRQKEGDFRKAESLYREALFRAQELRKQD----PDLLTGIYSLLAHLYDRWGRMDKAAEFYELALKISAENGLEESDKVATIKNNLAMIFKQLRKFERAETFQRLDGEQSARVASVYNNLGVLYYSHMDVDRAQVMHERALAIRQNLHEGQMDPADLSQTFINLGAVYKAAGD---FQKAEACVDRAKRIRAAMNGDTALERQIASASRSVEEARRLAYHDPIRVGALVEQISVLADLRQKEGD-FRKAESLYREALFRAQELRKQDPDLLTGIYSLLAHLYDRWGR-MDKAAEFYELALKISAENGLEESDKVATIKNNLKFERAEGYYCEALETFQRLDGEQARVASVYNNLGVLYYSHMDVDRAQVMHERALAIRQNLHEGQM |
5 | 3sf4A | 0.08 | 0.06 | 2.14 | 0.85 | EigenThreader | | -----------------------------------------------------MEAS-------CLELALEGERLCKSGDCRAGVSFFEAAVQVGTED--------------------------------------------------LKTLSAIYSQLGNAYFYL---HDYAKALEYHHHDLTLARTI---GDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN-------------DKVGEARALYNLGNVYHAKGKSEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLG----NFRDAVIAHEQRLLIAKEFGD-------------KAAERRAYSNLGNAYIFL----------------GEFETASEYYKKTLLLARQLKD--RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQEL--------------NDRIGEGRACWSLGNAYTALG--NHDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLGLSYS |
6 | 4hnwA | 0.09 | 0.09 | 3.31 | 1.28 | FFAS-3D | | ---------DAILKKDGSH--------VDSLALKGLDLYAASYVANAIRKIESASTKEYKESIKWFTYRDLATLQSQIGDFKNALVSRKKYWEAFLGYRANGERQQAINTLSQFEKKYEHSECLMYKNDIMYKAASDNQDKLQNVLKHLNDIFGLLERKATIYMKLGQLKDASIVYRTLIKYKLLEVSLGIQGDNKLKKALYGKLLPQLERGVPATFSNVKPLYQRRKSKVSPLLEKIVLDYLSLDPTQDPIPFIWTNYYLSQHFLFLKDFPKAQEYIDAALDHTPTLVEFYILKARILKHAAGILEEGRQL-DLQDRFINCKTVDKAVEVASLFTKNDDSVNGIKDLHLVEASWFIVEQAEAYYRLYLDRKKKLDDLASEQIANDIKENLKRFNAIPKFYKQFEDDQLDFHSYCMRKRAYLEMLEWTKPVRAMKEASKLYFQMHDDRLKRSQKKKAETSTPMEDFATEFYNYSMQVREDERDYIFERIGKLALCFASLNKFRNDTPFDPILKKVVT----KSLEKN |
7 | 4ui9O | 0.12 | 0.10 | 3.52 | 0.97 | SPARKS-K | | EFFLSQQASLLKNDETKALTPASLQKELNNLLKFNFAEAHYLSYLNNLRVQDSNGEEG-YGRSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQESNDH-----------------VCLQHCLSWLYVLGQKRSDSYVLLEHSVKKAVPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHS---LSELIDISIAQKTAIWRLYGR---STMALQQAQMLLSM-----------NSLEQQNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERFP--PNSQHAQLWMLCDQKIQFDRAMNDGKYHLYRKAVVLQAQAHKLLQKLLVHCQKLKNTEMVISVLLSVAELYWRS----------------------SSPTIALPMLLQALALSKEY--RLQYLASETVLNLAFAQLILG-IPEQALSLLHMAIEPILAD-------------GAILDKGRAMFLVAKCQQPKKAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLGKTQE |
8 | 5g04O | 0.13 | 0.11 | 3.68 | 1.42 | CNFpred | | ---------------------AEAHYLSYLNNLRVDVFSSTHSLLHYFDRLLTGAESKSN-RSLRYAALNLAALHCRFGHYQQAELALQEAIRIAQE---NDHVCLQHCLSWLYVLGQ--YVLLEHSVKKAV--------------GLPYLASLGIQSLVQQRAFAG--KTANKLMDALKDSDLLHWKH----LSELIDISIAQKTAIWRLYG---RSTMALQQAQMLLSMNSLE-----------QQNNTESFAVALCHLAELHAEQGCFAAASEVLKHLKERFPPNSQ-HAQLWMLCDQKIQFDRAMNDG----KYHLADSLVTGITGVYRKAVVLQAAHKLLQKLLVHCMVISVLLSVAELYWRS-----------------SPTIALPMLLQALALSKEYR--LQYLASETVLNLAFAQLIL-GIPEQALSLLHMAIEPILADG-------------AILDKGRAMFLVAKCQVA-KAEALEAAIENLNEAKNYFAKVDCKERIRDVVYFQARLYHTLGKTQE |
9 | 4kf7A | 0.06 | 0.05 | 2.22 | 1.00 | DEthreader | | --------------------FDQNAAKPDTTQLDALLKASQFAAPALV-T--F-------D--EF-FEP-VP-RGHELIAELLMPLHSLV-A----AIS---------L-KLL-NVDRTLSYDDALIQMHVGYQERENIEPAENMARIATGVYELMADMAVCLGGQLAAFRPVLGARARLTFQDLLKRSAYVGYQAEPVSCLLSILSGGSDAPSNKSALDIYTRMLNYASQSRNRYETLVAKLEFEHSTLFEEGISLLATVLRAET-LRSSKDPDRGLRILTASIVVCDTSLKTAALSSCLQFLHAALPVCP-G--RVWAYMARCPLINRLSRITANLDML--A-ERYDLLLSAVKLFSSLVDSAKT----------------SRVTLSIAQTSVDVFENSATWRFPSEVDRSVMIRVVGMYVVESLSSSSLRFQPLLATLLAAFQLPD--TTIYQRRAQIVSERLTTVLEFATILLVADSIQTQLFSACVIARLPAIRHSFR-I--P--SL--A--ESAGKRSTIR |
10 | 3sf4A | 0.10 | 0.07 | 2.44 | 0.87 | MapAlign | | -------------------------------------------------------------EASCLELALEGERLCKSGDCRAGVSFFEAAVQVG--------------------------------------------------TEDLKTLSAIYSQLGNAYFYL---HDYAKALEYHHHDLTLARTIG--D-QLGEAKASGNLGNTLKVLG---NFDEAIVCCQRHLDISRELND---------KVGEARALYNLGNVYHAKGKPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLL----GNFRDAVIAHEQRLLIAKEFG---------DKAAERRAYSNLGNAYIFLG------------------------EFETASEYYKKTLLLARQLRAVEAQSCYSLGNTYTLLQD-YEKAIDYHLKHLAIAQ-------------ELNDRIGEGRACWSLGNAY--TALGNHDQAMHFAEKHLEISREVGDKSGELTARLNLSDLQMVLG---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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