>P36888 (127 residues) GSREVQIHPDSDQISGLHGNSFHSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKG MLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGI LLWEIFS |
Sequence |
20 40 60 80 100 120 | | | | | | GSREVQIHPDSDQISGLHGNSFHSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS |
Prediction | CCCCCSSCCCCCSSSSSSCCCCCCSSSSSCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCSSCCCCSSSSCCCCCCSSCCCCCSSSSCCCCCSSSCCCCHHHHHHCCCCCHHHHHHHHHHHSSSSC |
Confidence | 9963320688313898984887522454303479943235778789999999999998155555998499925776444245883997499841101199889853997632445564332036509 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 | | | | | | GSREVQIHPDSDQISGLHGNSFHSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS |
Prediction | 8554244034102010002464432313421744415657655403352003003200210013572200000110013136664144477240103500100034442144012102101221336 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 | | | | | | | |||||||||||||
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SS Seq | CCCCCSSCCCCCSSSSSSCCCCCCSSSSSCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCSSCCCCSSSSCCCCCCSSCCCCCSSSSCCCCCSSSCCCCHHHHHHCCCCCHHHHHHHHHHHSSSSC GSREVQIHPDSDQISGLHGNSFHSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS | |||||||||||||||||||
1 | 6x8fA | 0.33 | 0.32 | 9.70 | 1.54 | SPARKS-K | WKQEIDITLYHEHIIKYKGCCLQL--VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLNDRLVKIGDFGLAKAVPEGHEYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT | |||||||||||||
2 | 1rjbA | 0.67 | 0.67 | 19.07 | 1.27 | MUSTER | MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLREKFLTFEDLLCFAYQVAKGMEFLEGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS | |||||||||||||
3 | 3zosA | 0.32 | 0.31 | 9.49 | 1.48 | FFAS-3D | --KEVKIDPNIIRLLGVCVQDDPLCMITDYMENGDLNQAAQGPTISYPMLLHVAAQIASNCLVGENFTIKIADFGMSRNLYAGDYYRVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEVLM | |||||||||||||
4 | 5x02A | 0.70 | 0.68 | 19.25 | 1.54 | CNFpred | ----LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKVLTFEDLLCFAYQVAKGMEFLEGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS | |||||||||||||
5 | 4oliA | 0.32 | 0.25 | 7.60 | 1.00 | DEthreader | --LS-SSQSRLVGS-LR-------D--YL---------PR--HSIGLAQLLLFAQQICEGMVLLDND-VKIGDFGLAKAVPEHYYRVRE-DGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT | |||||||||||||
6 | 4f4pA | 0.30 | 0.30 | 9.08 | 1.50 | SPARKS-K | AEANVMQQLDNPYIVRMIGICEAESWMMEMAELGPLNKYLQNRHVKDKNIIELVHQVSMGMKYLTQHYAKISDFGLSKALRADENYYKAQTHGWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS | |||||||||||||
7 | 4f4pA | 0.26 | 0.25 | 7.77 | 0.55 | MapAlign | ---ELGSGNFGTVKKGYVKTVAVLLAEANVMQQLLNKYLQQNRHVKDKNIIELVHQVSMNVLLVTQHYAKISDFGLSKALADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF- | |||||||||||||
8 | 3sxrA | 0.33 | 0.33 | 9.92 | 0.31 | CEthreader | QTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGLEPSQLLEMCYDVCEGMAVDRDLCVKVSDFGMTRYVLDDQYVSSVG-TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS | |||||||||||||
9 | 4oliA | 0.33 | 0.33 | 9.93 | 1.18 | MUSTER | WKQEIDIHEHIIKYKGCCQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHDNDVKIGDFGLAKAVPEGEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT | |||||||||||||
10 | 4oliA | 0.33 | 0.33 | 9.93 | 0.76 | HHsearch | WKQEIDIHEHIIKYKGCCEDQGELQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSNDVKIGDFGLAKAVPEGHEYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |