>P36406 (172 residues) MEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLR PLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALS VEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQLVAAGVLDVA |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQLVAAGVLDVA |
Prediction | CSSSSSSSCCCCCCHHHHHHHHHCCCCCCSCCCCCCCSSSSSSCCSSSSSSSCCCCHHHHHHHHHHCCCCCSSSSSSSCCCHHHHHHHHHHHHHHHHCHHHCCCSSSSSSSCCCCCCCCCHHHHHHHHCCHHHHCCCCCSSSSSSCCCCCCHHHHHHHHHHHHHHCCCCCCC |
Confidence | 9489999936999868999999389953204788873799998999999997799833788999971468716999858858899999999999996154459949999755578789999999999693666537984799976678979999999999999962677889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 | | | | | | | | MEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQLVAAGVLDVA |
Prediction | 5512000000330102000310366624422113213144052771402001001243014104410552402000011224410530361244006455154000000001222664142740373150551276342311101034453043004100530374552648 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 | | | | | | | | | |||||||||||||
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SS Seq | CSSSSSSSCCCCCCHHHHHHHHHCCCCCCSCCCCCCCSSSSSSCCSSSSSSSCCCCHHHHHHHHHHCCCCCSSSSSSSCCCHHHHHHHHHHHHHHHHCHHHCCCSSSSSSSCCCCCCCCCHHHHHHHHCCHHHHCCCCCSSSSSSCCCCCCHHHHHHHHHHHHHHCCCCCCC MEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQLVAAGVLDVA | |||||||||||||||||||
1 | 4m9qA | 0.35 | 0.34 | 10.08 | 1.50 | DEthreader | RKITIALLGLDNAGKTTLLNSIQ-GEDRDTTPTFGFNSTTLNEGKYKIEVFDLGGGKNIRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDKPICIFANKQDLPTAAPAAEVVKGL-GLATCR-NSHNVFPCTAKMVDRLRDGLKWLVGTVDREFGLD-- | |||||||||||||
2 | 3lvqE2 | 0.55 | 0.52 | 15.08 | 1.69 | SPARKS-K | KEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKL-GLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYK-------- | |||||||||||||
3 | 1n6oA | 0.22 | 0.20 | 6.40 | 0.50 | MapAlign | CQFKLVLLGESKVGKSSLVLRFVKGQFHEFQSTIGAAFLTQTVTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQ-ASPNIVIALSGNKADLKRAVDFQEAQSYA------DDNSLLFMETSAKTSMNVNEIFMAIAKKL--------- | |||||||||||||
4 | 1n6oA | 0.21 | 0.20 | 6.26 | 0.36 | CEthreader | CQFKLVLLGESKVGKSSLVLRFVKGQFHEFQSTIGAAFLTQTVCTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPN-IVIALSGNKADLKRAVDFQEAQSYADDNS------LLFMETSAKTSMNVNEIFMAIAKKLPKN------ | |||||||||||||
5 | 3dofA | 0.44 | 0.44 | 12.77 | 1.42 | MUSTER | RELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELDSI-RSHHWCIQGCSAVTGENLLPGIDWLLDDISSRIFTADL | |||||||||||||
6 | 3dofA | 0.44 | 0.44 | 12.77 | 0.86 | HHsearch | RELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELD-SIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSRIFTADL | |||||||||||||
7 | 1r4aA | 0.52 | 0.49 | 14.30 | 2.65 | FFAS-3D | -EMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGQTSIRPYWRCYYSNTDAVIYVVDSCDRDRIGISKSELVAMLEEEELRKAILVVFANKQDMEQAMTPSEMANALGLPA-LKDRKWQIFKTSATKGTGLDEAMEWLVETLKSR------ | |||||||||||||
8 | 3dofA | 0.44 | 0.44 | 12.77 | 0.62 | EigenThreader | RELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELDSIRS-HHWCIQGCSAVTGENLLPGIDWLLDDISSRIFTADL | |||||||||||||
9 | 1mr3F | 0.57 | 0.55 | 15.72 | 1.60 | CNFpred | KEMRILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNVETVQYKNISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVIDSNDRSRIGEAREVMQRMLNEDELRNAVWLVFANKQDLPEAMSAAEITEKLGLHSIRN-RPWFIQSTCATSGEGLYEGLEWLSNNLKNQS----- | |||||||||||||
10 | 3dofA | 0.44 | 0.43 | 12.60 | 1.50 | DEthreader | RELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVL-ELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSRIFTAD- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |