Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340
| | | | | | | | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCSCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSSSCCCCCCCCSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPGCQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGSGSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLTTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVKPRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQVRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASSKARSDDLSV |
1 | 6m04A1 | 0.09 | 0.05 | 2.03 | 0.83 | DEthreader | | --EV-SLNDIQPTYRILKPWWDVFMDYLAV-VMLMVAIFAGTMQLTKDQ--VVCLPKTLYINQMCYHLLPWKYFPYLALIHTIILMVSSNFWFKY-PKTCSKVEHFS-------------------EKVRKFRAHV-------EDSDLIYKLYVVQTVIKTAKFIFILCYTAN-FVNAISEHVCKPKVIGYEVFECTHNMAYMLKKLLISYISIICVYGFICLYTLFWLFIPLKYSFEKVREESSPDV-------------------------------------------------------------------------------------------------------------- |
2 | 7k18A2 | 0.07 | 0.06 | 2.60 | 0.67 | EigenThreader | | IFLGSFYLVNLILAVVAMAYEEQNQAEMLQVGNLVFTGIFTAEMTFKIIALDPY-----------YYFQQGWNIFDSIIVILSLMELIIGNSTLVLAIIVFIFAVVGMQLFGKNYSELRPRWHMMDFFHAFLIIFRILCGEWMVIGNLVVLNLFLALLLSSFWFETFIIFMILLSSGALAFE----DIYLEER-----KTIKVLLEYADKMFTYVFVLEMLLKWVAYGFKKYFTLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIFWLIFSIMGVNLFAGKFGRCINQTEGD-LPLNYTIVNNKSECESFNVTGELYWTKVKVNFDNVGAGYLA |
3 | 6l3tA | 0.36 | 0.20 | 5.99 | 3.90 | SPARKS-K | | --CGRFLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWE--------------------------------LSGGA--GSLRLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGSITCNLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRT------------------------------------------------------------------------------------------------------------------------- |
4 | 2k7mA | 0.68 | 0.21 | 5.89 | 2.09 | HHsearch | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPLGSTSLVQGLTPPPDFNQCLKNSPDEKFFSDFSNNMGSRKNPDPLATEEVPNQEQIPEEGFIHTQYGQKPEQPSGASAGHRFPQGYHSDKRRLSKASSKARSDDLSV |
5 | 2zw3A | 0.50 | 0.27 | 7.94 | 0.82 | MapAlign | | ---WGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRK-------------------------------FIKGKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLI------------------------------------------------------------------------------------------------------------------------------- |
6 | 2k7mA | 0.69 | 0.21 | 5.88 | 1.35 | FFAS-3D | | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLGSTSLVQGLTPPPDFNQCLKNSPDEKFFSDFSNNMGSRKNPDPLATEEVPNQEQIPEEGFIHTQYGQKPEQPSGASAGHRFPQGYHSDKRRLSKASSKARSDDLSV |
7 | 2zw3A | 0.49 | 0.28 | 8.03 | 0.85 | CEthreader | | --DWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKF-------------------------------IKGKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRY----------------------------------------------------------------------------------------------------------------------------- |
8 | 2zw3A | 0.49 | 0.28 | 8.03 | 2.19 | MUSTER | | --DWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRK-------------------------------FIKGKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRY----------------------------------------------------------------------------------------------------------------------------- |
9 | 2zw3A | 0.49 | 0.28 | 8.03 | 6.90 | HHsearch | | --DWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKFI-------------------------------KGKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRY----------------------------------------------------------------------------------------------------------------------------- |
10 | 6l3tA | 0.36 | 0.20 | 5.99 | 2.87 | FFAS-3D | | ---GRFLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWE----------------------------------LSGGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGSITCNLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWR-------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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