Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400
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| SS Seq | CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCSSSSCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCSSSSSSSCCCCCSSSSSCCCCCHHHCCHHHHCCCCCCCCCCCSSSCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCSSCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCSCCCCCSSCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCSSSSSSSCCCCCCCSSSCCCCCSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSCCCCCSSSSSSCCCCHHHHHHHHHHHHHHHHHCCCCCCC MKKKLVVLGLLAVVLVLVIVGLCLWLPSASKEPDNHVYTRAAMAADAKQCLEIGRDTLRDGGSAVDAAIAALLCVGLMNAHSMGIGVGLFLTIYNSTTGKAEVINAREVAPRLAFASMFNSSEQSQKGGLSVAVPGEIRGYELAHQRHGRLPWARLFQPSIQLARQGFPVGKGLAAVLENKRTVIEQQPVLWYVFCRDRKVLREGERLTLPRLADTYEMLAIEGAQAFYNGSLMAQIVKDIQAAGGIVTAEDLNNYRAELIEHPLNISLGDAVLYMPSARLSEFYTPDDGGTAHLSVVAEDGSAVSATSTINLYFGSKVCSPVSGILFNNEWTTSALPAFTNEFGAPPSPANFIQPGKQPLLSMCLTIMVGQDGQVRMVVGAVVQAIVRTAGGWAAALDSRKGGEPAGY |
1 | 4y23A | 0.29 | 0.26 | 7.82 | 1.33 | DEthreader | | ----------------------------------VAVGKDGMVATAHPLASKIGAEVLKKGGNAIDAAIAIQYALNVTEPMMSGIGGGGFMMVYDGETKETSIINSRERAPEGAKPDMFLDIPERSRHGNAVGVPGTLKGLEAAHKKWGTKKMEDLISPSIKLTEEGFPIDSVLADAIKDHQDKLSKT-AAKDIFLPDGEPLKEGDILVQKDMAKTFKLIRKEGSKAFYDGEIGRAIADVVQDFGGSMTPDDLSRYEVTTDKPIWGEYHG-YDIASMPPPSSGRAQEKIGEATHFTVTDQWGNVVSYTTTIEQLFGTGILVPGYGLFLNNELTDFDAI---------PGGANEVQPNKRPLSSMTPTIVFKD-EKPVLTVGSPGGTTIIASVFQTILNYFEYGMSLFID |
2 | 2nlzD | 0.23 | 0.22 | 6.73 | 3.92 | SPARKS-K | | --------------------MFDPQSYPYPSRRNVVYAKNGMVATSQPLAAQAGLDILKAGGNAIDAAIATATALTVLEPTSNGIGSDAFALVWTKG--KLHGLNGSGRAPMSLTMEAVKAKGYPPYGVIPVTVPGAPGAWAELAKMYGNLPLAASLAPAIRYAEEGYPVTPTLAKYWKAAYDRVKTEQPWFDTFAPKGRAPRVGEVWRSQGHADTLRSIAESNGESFYRGELADQIHAFFDKHGGYLTKEDLACYRPEWVEPISIDYRG-YRVWEIPPNGQALTPEPGTPTVYLATADGDGNMVSFIQSNYMGFGSGVVVPGTGIAMQNRGHNFSLD---------PNHDNALKPGKRTYHTIIPGFLTKND-QPIGPFGVMGGFMQPQGHMQVMMNTIDFGLNPQAA |
3 | 4y23A | 0.29 | 0.25 | 7.74 | 2.37 | MapAlign | | ---------------------------------------DGMVATAHPLASKIGAEVLKKGGNAIDAAIAIQYALNVTEPMMSGIGGGGFMMVYDGETKETSIINSRERAPEGAKPDMFLPFSERSRHGNAVGVPGTLKGLEAAHKKWGTKKMEDLISPSIKLTEEGFPIDSVLADAIKDHQDKLSKT-AAKDIFLPDGEPLKEGDILVQKDMAKTFKLIRKEGSKAFYDGEIGRAIADVVQDFGGSMTPDDLSRYEVTTDKPIWGEY-HGYDIASMPPPSSQPEDKTIGEATHFTVTDQWGNVVSYTTTIEQLFGTGILVPGYGLFLNNELTDFDAI---------PGGANEVQPNKRPLSSMTPTIVFK-DEKPVLTVGSPGGTTIIASVFQTILNYFEYGMSLQDA |
4 | 4y23A | 0.29 | 0.26 | 7.82 | 1.44 | CEthreader | | --------------------------------DKVAVGKDGMVATAHPLASKIGAEVLKKGGNAIDAAIAIQYALNVTEPMMSGIGGGGFMMVYDGETKETSIINSRERAPEGAKPDMFIPFSERSRHGNAVGVPGTLKGLEAAHKKWGTKKMEDLISPSIKLTEEGFPIDSVLADAIKDHQDKLSKT-AAKDIFLPDGEPLKEGDILVQKDMAKTFKLIRKEGSKAFYDGEIGRAIADVVQDFGGSMTPDDLSRYEVTTDKPIWGEYH-GYDIASMPPPSSQPEDKTIGEATHFTVTDQWGNVVSYTTTIEQLFGTGILVPGYGLFLNNELTDFDA---------IPGGANEVQPNKRPLSSMTPTIVFK-DEKPVLTVGSPGGTTIIASVFQTILNYFEYGMSLQDA |
5 | 2nlzD | 0.24 | 0.22 | 6.79 | 2.01 | MUSTER | | --------------------MFDPQSYPYPSRRNVVYAKNGMVATSQPLAAQAGLDILKAGGNAIDAAIATATALTVLEPTSNGIGSDAFALVWTK--GKLHGLNGSGRAPMSLTMEAVKAKGLPPYGVIPVTVPGAPGAWAELAKMYGNLPLAASLAPAIRYAEEGYPVTPTLAKYWKAAYDRVKTEWPWFDTFAPKGRAPRVGEVWRSQGHADTLRSIAESNGESFYRGELADQIHAFFDKHGGYLTKEDLACYRPEWVEPISIDYRGYRVWEIPPNGQGALTPEPGTPTVYLATADGDGNMVSFIQSNYMGFGSGVVVPGTGIAMQNRGHNFS---------LDPNHDNALKPGKRTYHTIIPGFLT-KNDQPIGPFGVMGGFMQPQGHMQVMMNTIDFGLNPQ-- |
6 | 4y23A | 0.30 | 0.26 | 8.02 | 4.18 | HHsearch | | -------------------------------DK-VAVGKDGMVATAHPLASKIGAEVLKKGGNAIDAAIAIQYALNVTEPMMSGIGGGGFMMVYDGETKETSIINSRERAPEGAKPDMFLDEDERSRHGNAVGVPGTLKGLEAAHKKWGTKKMEDLISPSIKLTEEGFPIDSVLADAIKDHQDKLS-KTAAKIFL-PDGEPLKEGDILVQKDMAKTFKLIRKEGSKAFYDGEIGRAIADVVQDFGGSMTPDDLSRYEVTTDKPIWGEY-HGYDIASMPPPSSEFRDKTIGEATHFTVTDQWGNVVSYTTTIEQLFGTGILVPGYGLFLNNELTDFDA---------IPGGANEVQPNKRPLSSMTPTIVFK-DEKPVLTVGSPGGTTIIASVFQTILNYFEYGEEPRIM |
7 | 4y23A | 0.30 | 0.26 | 8.01 | 3.24 | FFAS-3D | | --------------------------------DKVAVGKDGMVATAHPLASKIGAEVLKKGGNAIDAAIAIQYALNVTEPMMSGIGGGGFMMVYDGETKETSIINSRERAPEGAKPDMFLDEDGKVRHGNAVGVPGTLKGLEAAHKKWGTKKMEDLISPSIKLTEEGFPIDSVLADAIKDHQDKL-SKTAAKDIFLPDGEPLKEGDILVQKDMAKTFKLIRKEGSKAFYDGEIGRAIADVVQDFGGSMTPDDLSRYEVTTDKPIWGEYHGYDIASMPPPSSGQPEDKTIGEATHFTVTDQWGNVVSYTTTIEQLFGTGILVPGYGLFLNNELTDFD---------AIPGGANEVQPNKRPLSSMTPTIVF-KDEKPVLTVGSPGGTTIIASVFQTILNYFEYGMS---- |
8 | 4y23A | 0.25 | 0.22 | 6.83 | 2.42 | EigenThreader | | ---------------------------------DKVAGKDGMVATAHPLASKIGAEVLKKGGNAIDAAIAIQYALNVTEPMMSGIGGGGFMMVYDGETKETSIINSRERAPEGAKPDMFLPFSERSRHGNAVGVPGTLKGLEAAHKKWGTKKMEDLISPSIKLTEEGFPIDSVLADAIKDHQDKLSKTAAKDIFLPDGE-PLKEGDILVQKDMAKTFKLIRKEGSKAFYDGEIGRAIADVVQDFGGSMTPDDLSRYEVTTDKP-IWGEYHGYDIASMPPPSSQPEDKTIGEATHFTVTDQWGNVVSYTTTIEQLFGTGIVP-GYGLFLNNELTDFDAI--------PGGANEVQPNKRPLSSMTPTIVFKD---EKPVLTVGSPGGTTIIASVFQTILNYFEYGMSLQD |
9 | 2i3oA | 0.22 | 0.19 | 6.10 | 3.13 | CNFpred | | ----------------------------------NALSQRSVIASSSELASLAGRDILKRGGNIFDAALAVSAMLCVTQNNLCGLGGDLFALIRDE-NGQIMDLNGSGQASRAVSIDYYELTKIPERGPYAITVPGIAGSWDEIFRKFATMDIADILEPAIRTASAGFPITQNYSDSIARSAPVIGQYRGWSSIFMPNGSVPVAGEILKQPDLAESFRLMSEEGFRSFYDGSLADIIIAGLEGTGSPLSDRDLRVYRPLIGKPVFTDLD-EFRIYETSPNSQG-DHNDIGDTTYFSISDSEGRSVSIIQSNYMGFGSGIVPKGTGFVLQNRGSYFTLQ---------RDHPNALMPGKRTFHTLAACMVEKE-HDLYASLGSMGGDIQPQVQMQILMEILKDNTDPQAI |
10 | 6j3aA | 0.20 | 0.18 | 5.77 | 1.33 | DEthreader | | ---------------------------------PTLQGTFGMVSSTHWLASQSAMAVLEDGGNAYDAAVAGAFVLHVVEPHLNGPAGEVPILLAPAG-GEVRVLCGQGVAPAGATVAHYKGLLVPGTGPLAAAVPGAFDAWMLLLRDHGTKPLADVLKYAVGYAEHGHAPVENVGVTVETVRELFEEWTTSADVYLPGGKAPRPGELLRNPTLAATWKRLLAVAREVWRTGFIAEALVRQARRPTGTLTAADLAGWSATYEAPATYDWN-GWTVCKAGPWSQREAHAAPDLTCHLDVVDRWGNMVAATPSGG-WLQSNPVVPELGFPLGTRLQMTWLE---------EGLPNSLTPGRRPRTTLTPSIALRD-GIPVMAFGTPGGDQQDQWQLHFFLAVALRARVGLDD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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