Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCSSSSCCCCCSSSCCCHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCSSSSSSSSSSSSCCCCCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCCCCCSSSSSSCCCCCSSSCCHHHHHHCCCCHHHHCCCCCCCCSCCHHHHHHHHHHHHHHHHCCCCCCSSSSSSSCCCCSSSSSSSSSSSSSCCCCCSSSSSSSSCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCC MNSSSANITYASRKRRKPVQKTVKPIPAEGIKSNPSKRHRDRLNTELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPTERNGGQDNCRAANFREGLNLQEGEFLLQALNGFVLVVTTDALVFYASSTIQDYLGFQQSDVIHQSVYELIHTEDRAEFQRQLHWALNPSQCTESGQGIEEATGLPQTVVCYNPDQIPPENSPLMERCFICRLRCLLDNSSGFLAMNFQGKLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPSILEIRTKNFIFRTKHKLDFTPIGCDAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCAESHIRMIKTGESGMIVFRLLTKNNRWTWVQSNARLLYKNGRPDYIIVTQRPLTDEEGTEHLRKRNTKLPFMFTTGEAVLYEATNPFPAIMDPLPLRTKNGTSGKDSATTSTLSKDSLNPSSLLAAMMQQDESIYLYPASSTSSTAPFENNFFNESMNECRNWQDNTAPMGNDTILKHEQIDQPQDVNSFAGGHPGLFQDSKNSDLYSIMKNLGIDFEDIRHMQNEKFFRNDFSGEVDFRDIDLTDEILTYVQDSLSKSPFIPS |
1 | 4f3lA | 0.25 | 0.13 | 4.09 | 1.79 | SPARKS-K | | ----------------------------------SEKKRRDQFNVLIKELGSMLP---GNARKMDKSTVLQKSIDFLRKHKETTAQSDASEIRQDWKPTFLS--------NEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHL-----------------------LESDSLTPEYLKSKNQLEFCCHMLRGTIEPSTYEYVRFIGNFKSLTRV--------------CFVATVRLATPQFIKEMCTVEEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLG-TSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHNSRPEFIVCTHTVVSYAEVRAE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
2 | 6mfzA | 0.06 | 0.04 | 1.55 | 0.67 | DEthreader | | LYRIEPGEIELVGIPTYQADVAPTD---------------EL-EQQLAQVWSHVLGIPQMGIDDHF-LERGGDSIKVMQLHY---VVY-IEQIRVALEQLLRHGLRSPLLSLKSLAR-------------LPV-------RVNPEITRLKAALYMLTIVSIWLSKMNSDSVILGTV-TLP-L-------------PA----KILEAKREGNHPMISKFDLTLEV----------LNIVFEYN--------------------------VAQFEHTEDERDFLRVNDTAKGLVKGVMIEALNVHGMQDEYPLISVAEIFGN-VLACGEAMN-YGP-TE--A---------YASRYSLAKVPIGKPMYCIARG-NPATEFTRIYR-ARYREDGN-IE-YLG-M-HQVKI---ELDEIRSKLETIQDAVVVARNDQN-------YQEFVLLKQFPLTGKLDRKAL-PE------RDNFF-------------------------------------------INWTM--------------------------VI-NHLFLY-------------------------------------- |
3 | 4f3lA | 0.25 | 0.13 | 3.95 | 1.03 | MapAlign | | -----------------------------------EKKRRDQFNVLIKELGSMLPG--NARK-MDKSTVLQKSIDFLRKHKETT--------AQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLL---------------------------ESDSLTPEYNQLEFCCHMLRGTIEPSTYEYVRFIGNFKS--------------LTRVCFVATVRLATPQFIKEMCTVNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVL-GTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHNSRPEFIVCTHTVVSYAEVRA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
4 | 4f3lA | 0.23 | 0.12 | 3.79 | 0.52 | CEthreader | | ----------------------------------SEKKRRDQFNVLIKELGSMLPG---NARKMDKSTVLQKSIDFLRKHKETTA------QSDASEIRQDWKPTFLSNE--EFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKIL---------STHLLESDSLTPEYLKSKN--------------QLEFCCHMLRGTIDPKEPSTYEYVRFIGNFKSLTR--------VCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVL-GTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHNSRPEFIVCTHTVVSYAEVRAE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
5 | 4f3lA | 0.25 | 0.13 | 4.05 | 1.33 | MUSTER | | ----------------------------------SEKKRRDQFNVLIKELGSMLPGNA---RKMDKSTVLQKSIDFLRKHKETTAQSDASEIRQDWKPTFLSN---------EFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESDSLTPEYLKSKN-----------------------QLEFCCHMLRGTIDPSTYEYVRFIGNFKSLTR--------------VCFVATVRLATPQFIKEVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGT-SGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHNSRPEFIVCTHTVVSYAEVRAE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 4f3lA | 0.26 | 0.13 | 4.14 | 3.73 | HHsearch | | ----------------------------------SEKKRRDQFNVLIKELGSMLPG---NARKMDKSTVLQKSIDFLRKHKETTAQSDAS-----EIRQDWK-PTFLSNEEF--TQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESDS-------------------LTPEYLK----SKNQLEFCCHMLRGTIEPSTYEYVRFIGNFKSLT--------------RVCFVATVRLATPQFIKEMEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVL-GTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHNSRPEFIVCTHTVVSYAEVRAE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 4f3lA | 0.25 | 0.13 | 4.06 | 2.59 | FFAS-3D | | ----------------------------------SEKKRRDQFNVLIKELGSMLPGN---ARKMDKSTVLQKSIDFLRKHKETTAQSDASEIRQDWKPTFLS--------NEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLESDSLTPEYLKSKNQL--------------------EFCCHMLRGTIDPKEPSTYEYVRFIGNFKS-----------LTRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGT-SGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHNSRPEFIVCTHTVVSYAEVRA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
8 | 4f3lA | 0.20 | 0.11 | 3.37 | 1.05 | EigenThreader | | --------------------------------SEKKRRDQFNVLIKELGSM---LPGN--ARKMDKSTVLQKSIDFLRKHKETTA--------QSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHLLE-----------------------SDSLTPEYLKSKNQLEFCCHMLRGTIEPSTYEYVRFIGNFKSLTR--------------VCFVATVRLATPQFICTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVL-GTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLT-KGQQWIWLQTHYYITHQWNSRFIVCTHTVVSYAEVRAE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 4f3lA | 0.26 | 0.13 | 4.09 | 3.21 | CNFpred | | ----------------------------------SEKKRRDQFNVLIKELGSMLPG---NARKMDKSTVLQKSIDFLRKHKETTAQSDASEIRQDWK------PTFLSNEE--FTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSIFNFIPEGEHSEVYKILSTHL--------------------ESDSLTPEYL----KSKNQLEFCCHMLRGT-EPSTYEYVRFIGNFKSLT--------------RVCFVATVRLATPQFIKEMCTVNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLG-TSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQSRPEFIVCTHTVVSYAEVRAE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
10 | 6n8eA | 0.06 | 0.04 | 1.53 | 0.67 | DEthreader | | -------------------------------------------------------------------------------AAHVGV-ARDFRAEP-DS-TG-AAHAWMAADLRTGTR--------------PTL-HTAPVPAALVERLFAWINVVVAAFGAFVGRATSR--I-----------------EDIRRDCHLIGGRRGPADDANPALYRPHEARWERAFAFVADPSCPRLDAYL-------------------------------PG---------LPEP-DLIIFTSKPKGVKITHRNVVRLFE------YVFDASVWIGGEAL-------------------YGITTTINATYVGIMYVT-------NRPDLDRFRMYR--ARLHPDGVLEYVGRA-QQVIELGEVEARLREYAPVSDAVVSVRRDAQLVA-VVEALFGTLDALPMGKVDRKALPDIS----PAQARAAAPIVVYGNAVLAIGMLLDED------------AETRAPARL-V---VI-DPLT-YYLDVIPDGGH-YF-----VTEHA-DTLAGLLAAR----------RQA------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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