Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320
| | | | | | | | | | | | | | | | |
| SS Seq | CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCSCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCSSSSCCCCCCCCSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPGCTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKDPQVERALAAVERQMAKISVAEDGRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLYGWTMEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHLLCRCLSRGMRARQGQDAPPTQGTSSDPYTDQVFFYLPVGQGPSSPPCPTYNGLSSSEQNWANLTTEERLASSRPPLFLDPPPQNGQKPPSRPSSSASKKQYV |
1 | 6l3tA | 0.38 | 0.23 | 6.85 | 4.19 | SPARKS-K | | --CGRFLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHWE------------------------------------LSGGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGSITCNLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWRT---------------------------------------------------------------------------------------------- |
2 | 6m04A1 | 0.12 | 0.11 | 3.69 | 0.84 | MapAlign | | ----TLAEVASLNTYRILKPWWDVFMDYLAVVMLMVAIFAGTMQLTKDQ--VVCLPVYVFINQMCYLALPSKYFPYLALIHTIILMVSSNFWFPKTCSKVEHFVSILGKCFESKALSETDKKDGEQAKALFEKVRKFR----AHVEDSDLIYKLYVVQTVIKTAKFIFILCYTANFV-NAISFEHVCKPKVIYEVFECTHNMAYMLKKLLISYISIICVYGFICLYTLFWLFRKEYSFEKVR-------EESSFSDIPDVKNDFAFLLHMVDQYDQLYSKRFGVFLSEVSENKLREISLNHE------------------------------- |
3 | 2zw3A | 0.54 | 0.32 | 9.36 | 0.84 | CEthreader | | --DWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKF---------------------------------IKGKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRY-------------------------------------------------------------------------------------------------- |
4 | 6m04A | 0.10 | 0.07 | 2.55 | 0.83 | DEthreader | | -------------R--ILKPWWDVFMDYLAVVMLMVAIFAGTMQLTKD-Q-VVCLFQQVFINQMCYHLLPWYKFPYLALIHTIILMVSSNFWFKY-PKTCSKVEHF-----------------------KVRKFRAHVE--------SDLIYKLYVVQTVIKTAKFIFILCYTANFVNAISFEHVCKPKVLIGYEFECTHNMAYMLKKLLISYISIICVYGFICLYTLFWLFRIPLKEYSFEKVRE-S-PDV----------------------------------NKLREISLNHEWTF-E----------------KL-QHQELHLFML-- |
5 | 2zw3A | 0.54 | 0.32 | 9.36 | 2.32 | MUSTER | | --DWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRK---------------------------------FIKGKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRY-------------------------------------------------------------------------------------------------- |
6 | 2zw3A | 0.54 | 0.32 | 9.36 | 7.05 | HHsearch | | --DWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKFI---------------------------------KGKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRY-------------------------------------------------------------------------------------------------- |
7 | 6l3tA | 0.39 | 0.23 | 6.92 | 2.74 | FFAS-3D | | ---GRFLRRLLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFTLYHVIWHW------------------------------------ELSGGAGSLRLLWAYVAQLGARLVLEGAALGLQYHLYGFQMPSSFACRREPCLGSITCNLSRPSEKTIFLKTMFGVSGFCLLFTFLELVLLGLGRWWR----------------------------------------------------------------------------------------------- |
8 | 2zw3A | 0.51 | 0.30 | 8.70 | 0.85 | EigenThreader | | -DWGTLQTILGG-----VNKHGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKF---------------------------------IKGKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRY-------------------------------------------------------------------------------------------------- |
9 | 6mhyA | 0.66 | 0.35 | 9.94 | 1.92 | CNFpred | | -GDWSFLGNILEEVNEHSTVIGRVWLTVLFIFRILILGTAADFVWGDEQSDFVCNTQQPGCENVCYDEAFPISHIRLWVLQIIFVSTPSLVYVGHAV-----------------------------------------------------LLRTYVCHIIFKTLFEVGFIVGHYFLYGFRILPLYRCSRWPCPNVVDCFVSRPTEKTIFILFMLSVASVSLFLNILEMSHL------------------------------------------------------------------------------------------------------ |
10 | 6m04A1 | 0.08 | 0.05 | 2.14 | 0.83 | DEthreader | | ------------ILKPWWDVFMDYLAVVMLMVAIFAGT-MQLTKD-QV--VCLPLDFQQFINQMCYHLALPWYSKYFPYLALIHTIILMVSSNFWFKYTCSKVEHFVS-----------------KVRKFRAHVEDSD--------LIYKLYVVQTVIKTAKFIFILCYTANFVN-A-ISFEHVCKPKVEHLIGYEVFECTH--NMAYMLKKLLISYISIICVYGFICYTLFWLFRIPLKEYSFEKVREESPDVKN-------------------------EVSE-NKLREISLN--------------------------HEW--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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