Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300
| | | | | | | | | | | | | | | |
| SS Seq | CCCCCCCCCSCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCSSSSSHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCSSSSSSSSCCCCCCCCCCCCHHHCCCSSSSSSSSSSCCCSSSSSSSSSSSSCCCCCSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSCCCCSSSSCSSSSSSCCCCCCCCCCCCCSSSSSSSCCCCCCCCCCCSSSSSSSSSSCCCCCCCCCCCCCSSSSSSSCCSSSSSSSSC MSGFDDPGIFYSDSFGGDAQADEGQARKSQLQRRFKEFLRQYRVGTDRTGFTFKYRDELKRHYNLGEYWIEVEMEDLASFDEDLADYLYKQPAEHLQLLEEAAKEVADEVTRPRPSGEEVLQDIQVMLKSDASPSSIRSLKSDMMSHLVKIPGIIIAASAVRAKATRISIQCRSCRNTLTNIAMRPGLEGYALPRKCNTDQAGRPKCPLDPYFIMPDKCKCVDFQTLKLQELPDAVPHGEMPRHMQLYCDRYLCDKVVPGNRVTIMGIYSIKKFGLTTSRGRDRVGVGIRSSYIRVLGIQVD |
1 | 6raw7 | 0.19 | 0.17 | 5.35 | 1.33 | DEthreader | | ------------------------RRDYAQDRESIKTFLSEFCKCDDDGKKEFVYGSQLVKLAHREQVLITIDLDDLAEFNESLAEAVVDNCRRYTSIFSDVIAEL--LPS-EVHADVIEMKRFEVGFKPLEKAHSIREVKAQHIGKLVTVRGIVTRCTEVKPMMVVATYTCDRCGSETYQP-VNSL-SFTPVHDCPSDDCRVNKAG--GRLYLQTRGSKFVKFQEVKMQEHSDQVPVGHIPRSMTIMCRGEVTRMAQPGDHIVVSGVFLPLMRTGFA----QMIQGLLSETFLQAHRIICN |
2 | 4pofA | 0.20 | 0.17 | 5.30 | 3.29 | SPARKS-K | | ------------------------SVDREEMIERFANFLREYTDEDGN----PVYRGKITDLLTTPKRSVAIDWMHLNSFDSELAHEVIENPEEGISAAEDAIQIVLREDFQRED-----VGKIHARFYNLPETLMVKDIGAEHINKLIQVEGIVTRVGEIKPFVSVAVFVCKDCGHE-MIVPQKPYES-LEKVKKCEQCGSKN-------IELDVNKSSFVNFQSFRIQDRPETLKGGEMPRFIDGILLDDIVDVALPGDRVIVTGILRVVLEKRE--------KTPIFRKILEVNHIEPV |
3 | 4pofA | 0.21 | 0.17 | 5.48 | 1.34 | MapAlign | | ------------------------SVDREEMIERFANFLREYTD----EDGNPVYRGKITDLLITPKRSVAIDWMHLNSFDSELAHEVIENPEEGISAAEDAIQIVLREDFQRE-----DVGKIHARFYNLPETLMVKDIGAEHINKLIQVEGIVTRVGEIKPFVSVAVFVCKDCGHEM-IVPQKPYESLE-KVKKCEQ-------CGSKNIELDVNKSSFVNFQSFRIQDRPETLKGGEMPRFIDGILLDDIVDVALPGDRVIVTGILRVVLE--------KREKTPIFRKILEVNHIEPV |
4 | 4pofA | 0.21 | 0.17 | 5.48 | 0.85 | CEthreader | | ------------------------SVDREEMIERFANFLREYTDEDG----NPVYRGKITDLLITPKRSVAIDWMHLNSFDSELAHEVIENPEEGISAAEDAIQIVLREDFQR-----EDVGKIHARFYNLPETLMVKDIGAEHINKLIQVEGIVTRVGEIKPFVSVAVFVCKDCGHEMIVPQKP--YESLEKVKKCEQ-------CGSKNIELDVNKSSFVNFQSFRIQDRPETLKGGEMPRFIDGILLDDIVDVALPGDRVIVTGILRVVLEKREK--------TPIFRKILEVNHIEPV |
5 | 3ja85 | 0.37 | 0.34 | 10.13 | 2.27 | MUSTER | | --SFDRPEIYSAPVLQGES---PNDDDNTEIIKSFKNFILEFRLD-----SQFIYRDQLRNNILVKNYSLTVNMEHLIGYNEDIYKKLSDEPSDIIPLFETAITQVAKRISILSRAQSASLPTFQLILNSNANQIPLRDLDSEHVSKIVRLSGIIISTSVLSSRATYLSIMCRNCRHTTSITINNFNTGNTVLPRSC--------NCGPDPYIIIHESSKFIDQQFLKLQEIPELVPVGEMPRNLTMTCDRYLTNKVIPGTRVTIVGIYSIYNSKNGSGVAI-------RTPYIKILGIQSD |
6 | 3ja871 | 0.19 | 0.17 | 5.47 | 2.57 | HHsearch | | MSA--------------ALPSIQLPVDYNNLFNEITDFLVTFKQD-----KGPKYMAMLQKVANRELNSVIIDLDDILQYQDDLVSAIQQNANHFTELFCRAIDNNMPLPTKEIDYPPNLTRRYFLYFKPLSKPLSVRQIKGDFLGQLITVRGIITRVSDVKPAVEVIAYTCDQCGYEVF-QEVNSR--TFTPLSECTSEECSQ-NQTKGQLFMSTRASKFSAFQECKIQELSQQVPVGHIPRSLNIHVNGTLVRSLSPGDIVDVTGIFLPAPYTGFKA----LKAGLLTETYLEAQFVRQH |
7 | 3ja821 | 0.23 | 0.20 | 6.21 | 2.87 | FFAS-3D | | ---------------------------SRTIARELKSFLLEYTDETGR----SVYGARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEEMLKIFDLVAMEATELH---YPDYARIHSEIHVRISDFPTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLKCGSILGPFFQDSNEE--------IRISFCTNCKSKGPFRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLADLVDVSKPGEEVEVTGIYKNNYDGNLNAKNGFP----VFATIIEANSIKRR |
8 | 3ja871 | 0.17 | 0.15 | 5.02 | 1.53 | EigenThreader | | --------------MSAALPSIQLPVDYNNLFNEITDFL-----VTFKQDKGPKYMAMLQKVANRELNSVIIDLDDILQYQNEKFSAIQQNANHFTELFCRAIDNNVVEDETELFPPNLTRRYFLYFKPLSSKPLSVRQIKGDFLGQLITVRGIITRVSDVKPAVEVIAYTCDQCGYEVFQEVNSRTFTPLSECTSEEC----SQNQTKGQLFMSTRASKFSAFQECKIQELSQQVPVGHIPRSLNIHVNGTLVRSLSPGDIVDVTGIFL----PAPYTGFKALKAGLLTETYLEAQFVRQH |
9 | 6xtx5 | 1.00 | 0.88 | 24.57 | 2.54 | CNFpred | | --------------------ADEGQARKSQLQRRFKEFLRQYRVGTDRTGFTFKYRDELKRHYNLGEYWIEVEMEDLASFDEDLADYLYKQPAEHLQLLEEAAKEVADEVTRPRPSGEEVLQDIQVMLKSDASPSSIRSLKSDMMSHLVKIPGIIIAASAVRAKATRISIQCRSCRNTLTNIAMRPGLEGYALPRKCN--------CPLDPYFIMPDKCKCVDFQTLKLQELPDAVPHGEMPRHMQLYCDRYLCDKVVPGNRVTIMGIYSIKKFG---------VGVGIRSSYIRVLGIQVD |
10 | 3ja87 | 0.18 | 0.16 | 5.16 | 1.33 | DEthreader | | ---------------------QLPVDY-NNLFNEITDFLVTFKQD-----KGPKYMAMLQKVANRELNSVIIDLDDILQYQDDLVSAIQQNANHFTELFCRAIDNNM--PLPTKEIVILNTRRYFLYFKPLSKPLSVRQIKGDFLGQLITVRGIITRVSDVKPAVEVIAYTCD-QCGYEVFQEVN-SRTFTPLSECTSEECSQNQTK--GQLFMSTRASKFSAFQECKIQELSQQVPVGHIPRSLNIHVNGTLVRSLSPGDIVDVTGIFLPAPYTG-------KALKGLTETYLEAQFVRQH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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