>P33032 (99 residues) LVIADAFVRHIDNVFDSMICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTARRSGAII AGIWAFCTGCGIVFILYSESTYVILCLISMFFAMLFLLV |
Sequence |
20 40 60 80 | | | | LVIADAFVRHIDNVFDSMICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTARRSGAIIAGIWAFCTGCGIVFILYSESTYVILCLISMFFAMLFLLV |
Prediction | CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSSHHHHHHHHHHHHHHC |
Confidence | 988673478999999999999999999999999999999982403346425689999999999999999998887458994432136999999999959 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 | | | | LVIADAFVRHIDNVFDSMICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTARRSGAIIAGIWAFCTGCGIVFILYSESTYVILCLISMFFAMLFLLV |
Prediction | 754545214301311100113013113310210132022003301414442243201000010123033323212334443120000233333333334 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 | | | | | |||||||||||||
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SS Seq | CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSSSHHHHHHHHHHHHHHC LVIADAFVRHIDNVFDSMICISVVASMCSLLAIAVDRYVTIFYALRYHHIMTARRSGAIIAGIWAFCTGCGIVFILYSESTYVILCLISMFFAMLFLLV | |||||||||||||||||||
1 | 6li0A1 | 0.22 | 0.22 | 6.99 | 1.33 | DEthreader | SVVGVH-ESLTCQVFGYIISVLKSVSMWCLACISVDRYLAITKPLSYNQLVTPCRLRICIILIWIYSCLIFLPSFFWGTSYFTGFIVCLLAPAAFVVFT | |||||||||||||
2 | 3oduA1 | 0.13 | 0.13 | 4.55 | 1.46 | SPARKS-K | AVANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFWVVVFQFQHIMVGLILPGIVIL | |||||||||||||
3 | 7ckwR | 0.20 | 0.20 | 6.45 | 0.61 | MapAlign | EIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFILISVAWTLSVLISFIPVQSLSRTYAISSSVISYIPVAIMIV | |||||||||||||
4 | 7ckwR | 0.21 | 0.21 | 6.73 | 0.44 | CEthreader | EIAGFWPFGSFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKAAFILISVAWTLSVLISFIPVQLSWHTYAISSSVISFYIPVAIMI | |||||||||||||
5 | 6kuwA | 0.24 | 0.24 | 7.55 | 1.21 | MUSTER | LMAYWYFGQWWCGVYLALDVLFCTSSAVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSDETWYILSSCIGSFFAPCLIMG | |||||||||||||
6 | 6kp6A | 0.18 | 0.18 | 5.91 | 1.36 | HHsearch | IKGYWPLGAVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPARRTTKMAALMIAAAWVLSFVLWAPAILFWQPAVTFGTAIAAFYLPVVIMT | |||||||||||||
7 | 3oduA1 | 0.13 | 0.13 | 4.55 | 1.55 | FFAS-3D | AVANWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFWVVVFQFQHIMVGLILPGIVIL | |||||||||||||
8 | 6w25A | 0.62 | 0.62 | 17.64 | 0.72 | EigenThreader | STDAQSFTVNIDNVIDSVICASLLASICSLLSIAVDRYFTIFYALQYHNIMTVKRVGIIISCIWAACTVSGILFIIYSDSSAVIICLITMFFTMLALMA | |||||||||||||
9 | 5v54A | 0.22 | 0.22 | 6.99 | 0.88 | CNFpred | VTGRWTLGQVVCDFWLSSDITCCTASIWHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPPFFWR-ILYTVYSTVGAFYFPTLLLI | |||||||||||||
10 | 6li0A | 0.22 | 0.22 | 6.99 | 1.33 | DEthreader | SVVGVH-ESLTCQVFGYIISVLKSVSMWCLACISVDRYLAITKPLSYNQLVTPCRLRICIILIWIYSCLIFLPSFFWGTSYFTGFIVCLLAPAAFVVFT | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |