Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSSSCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHCCCCCCSSSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCSSSSSCCCHHHHHHHHHHHHHHHHHHHHCCCCCCSSSSCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC MEGEGNETGECTGSYYCKKGVILPIWEPQDPSFGDKIARATVYFVAMVYMFLGVSIIADRFMSSIEVITSQEKEITIKKPNGETTKTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFTAGDLGPSTIVGSAAFNMFIIIALCVYVVPDGETRKIKHLRVFFVTAAWSIFAYTWLYIILSVISPGVVEVWEGLLTFFFFPICVVFAWVADRRLTVSAGEDDDDDECGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHAANGEQFKVSPGTLAFSVTLFTIFAFINVGVLLYRRRPEIGGELGGPRTAKLLTSCLFVLLWLLYIFFSSLEAYCHIKGF |
1 | 4kppA | 0.11 | 0.08 | 3.01 | 1.00 | DEthreader | | --------------------------------------H-HPALTQTLLSGLAVVSASFLISWAAETAEMDV-----------------PRS---FSLAIVAL-LAVLPEYAVDGYFAWKSVGGEVHYATANMTGANRLLIGIGWSLVAFIARTLKSKEVELDDGIRLEIFFLFLATLYAFTLPLK-G-H-ISPFDALVFVSLYAIYIYLSTK-AE-R-EE--E---------------------------GV--YLCSLTRRLSVVVLFLFAGFTILMSVEAFSEGLLETARIAGIDEFLAVQWIAPLASESPELIVAIYFVR-RFRVSASMNALISSKVNQWTLLIGTIAIIYSISAFK-L-QSLPLDARQSEEVLLTAAQSLFAVAILLDLK--------I----SW-KEASALFLLFIVQLLF-PGV---EVRYI |
2 | 4k1cA | 0.11 | 0.09 | 3.22 | 2.58 | SPARKS-K | | ---------TAWRAAVYDLQYILKASPLNFLLVFVPLGLIWGHFLTFLFNFLAIIPLAAILANATEELADKAGN---------------------TIGGLLNATFGNAVELIVSIIALKK---GQVRIVQASMLGSLLSNLLLVLGLCFIFGGYNRVQQTFNQTAAQTMSSLLAIACASLLIPAAFRATLELSRGTSIVILIVYVLFLYFQLG--------------------SHHALFEQQEEETDEVMSTISRNPHHSLSVKSSLVILLGTTVIISFCADFLVGTIDNVVESTGLSKTFIGLIVIPIVGNAAEHVTSVLVAMK-DKMDLALGVAIGSSLQVALFVTPFMVLVGWMI----DVPMTLNFST---FETATLFIAVFLSNYLILDGESN------------WLEGVMSLAMYILIAMAFFYYPDE----- |
3 | 3v5sA | 0.18 | 0.12 | 3.92 | 1.66 | MapAlign | | --------------------------------------MVILGVGYFLLGLILLYYGSDWFVLGSERIARHF------------------NVSNFVIGATVMAIGTSLPEILTSAYASY---MHAPGISIGNAIGSCICNIGLVLGLSAIISP------II---VDKNLQKNILVYLLFVIFAAVIGI-DGFSWIDGVVLLILFIIYLRWTVKNG---------------------------------------------PSVVFSLVLLIIGLIGVLVGAELFVDGAKKIALALDISDKVIGFTLVAFGTSLPELMVSLAAAKR-NLGGMVLGNVIGSNIADIGGALAVGSLFM---------HLPA----ENVQMAVLVIMSLLLYLFAKYSK-------------IGRWQGILFLALYIIAIALRM---------- |
4 | 3v5sA | 0.18 | 0.12 | 3.92 | 1.08 | CEthreader | | --------------------------------------MVILGVGYFLLGLILLYYGSDWFVLGSERIARHFN------------------VSNFVIGATVMAIGTSLPEILTSAYASYMHA---PGISIGNAIGSCICNIGLVLGLSAIISP---------IIVDKNLQKNILVYLLFVIFAAVIGIDG-FSWIDGVVLLILFIIYLRWTVKNGP---------------------------------------------SVVFSLVLLIIGLIGVLVGAELFVDGAKKIALALDISDKVIGFTLVAFGTSLPELMVSLAAAKR-NLGGMVLGNVIGSNIADIGGALAVGSLFM---------HLPAENVQMAVLVIMSLLLYLFAKYSKI-----------------GRWQGILFLALYIIAIASLRM--------- |
5 | 4kppA | 0.13 | 0.11 | 3.71 | 1.46 | MUSTER | | -DFTKEKFQLLAISSLTLPWLISLAFNYHHP-----------ALTQTLLSGLAVVSASFLISWAAETAEMDV--------------------PRSF-SLAIVALLAVLPEYAVDGYFAWKAGSVGGHYATANMTGANRLLIGIGWSLVAFIAFRTLKSKEVELD---GIRLEIFFLFLATLYAFTLPLKGHISPFDALVFVSLYAIYIYLSTKAEREEVEVGG--------------------------VPAYLCSLKTETRRLSVVVLFLFAGFTILMSVEAFSEGLLETARIAGIDEFLAVQWIAPLASESPELIVAIYFVRR-FRVSASMNALISSKVNQWTLLIGTIAIIYSISAFKLQS---LPLDARQSEEVLLTAAQSLFAVAILLDLKIS------------WKEASALFLLFIVQLLFPGVEVRYIISAI |
6 | 4k1cA | 0.11 | 0.09 | 3.34 | 4.68 | HHsearch | | ---TAWRAAVYDLQYLKASPLNF-------LLVFVPL-GLISHTLTFLFNFLAIIPLAAILANATEELADKAG--------------------NTIGGLLNATFG-NAVELIVSIIALK---KGQVRIVQASMLGSLLSNLLLVLGLCFIFGGYNRVQQTFNQTAAQTMSSLLAIACASLLIPAAFTLPFELSRGTSIVILIVYVLFLYFQLGSHHALFEQQEEETDEVMSTISRNP--------------------HHSLSVKSSLVILLGTTVIISFCADFLVGTIDNVVESTGLSKTFIGLIVIPIVGNAAEHVTSVLVAMK-DKMDLALGVAIGSSLQVALFVTPFMVLVGWMI----DVPMTLNFS--TFET-ATLFIAVFLSNYLILDGE------------SNWLEGVMSLAMYILIAMAFFYYPDE----- |
7 | 4k1cA | 0.11 | 0.09 | 3.26 | 2.30 | FFAS-3D | | ----------------------------------RAAVYDLQYILKFLLVFVPLGLIWGHFLFNFLAIIPLAAILAN----ATEELADKAGNT---IGGLLNATFGNAVELIVSIIALKKGQV---RIVQASMLGSLLSNLLLVLGLCFIFGGYNRVQQTFNQTAAQTMSSLLAIACASLLIPAAFRATLPFIDGKILELSRGTSIVILIVYVLFLYFQLGSH------------HALFEQQEEETDEVMSTISRNPHHSLSVKSSLVILLGTTVIISFCADFLVGTIDNVVESTGLSKTFIGLIVIPIVGNAAEHVTSVLVAMKD-KMDLALGVAIGSSLQVALFVTPFMVLVGWM------IDVPMTLNFSTFETATLFIAVFLSNYLILDG-------------ESNWLEGVMSLAMYILIAMAFF---------- |
8 | 4k1cA | 0.10 | 0.08 | 3.10 | 2.18 | EigenThreader | | -------TAWRAAVYDLQYILKASPLNFLLVFVPLGLIWGHFQTLTFLFNFLAIIPLAAILANATEELADK---------------------AGNTIGGLLNATFGNAVELIVSIIALK---KGQVRIVQASMLGSLLSNLLLVLGLCFIFGGYNRVQQNQT--AAQTMSSLLAIACASLLIPAAFRATLPFIELSRGTSIVILIVYVLFLYFQLG-------------------SHHALFEQQEEETDEVMSTISRNHSLSVKSSLVILLGTTVIISFCADFLVGTIDNVVESTGLSKTFIGLIVIPIVGNAAEHVTSVLVAMK-DKMDLALGVAIGSSLQVALFVTPFMVLVGWMID--VPMTLNFSTFETATLFIAVFLSNYLILDG-----------------ESNWLEGVMSLAMYILIAMAFFY---YPDE-- |
9 | 4kppA | 0.12 | 0.09 | 3.27 | 1.88 | CNFpred | | -------------------------------------------LTQTLLSGLAVVSASFLISWAAETAEMDVPR---------------------SFSLAIVALLAVLPEYAVDGYFAWKAGSVYVHYATANMTGANRLLIGIGWSLVAFIAFRTLSKEVELDDGIRLEIFFLFLATLYAFTLPLKG---HISPFDALVFVSLYAIYIYLSTKAEREEVE--------------------------VGGVPAYLCSLKTETRRLSVVVLFLFAGFTILMSVEAFSEGLLETARIAGIDEFLAVQWIAPLASESPELIVAIYFVRR-FRVSASMNALISSKVNQWTLLIGTIAIIYSISAFK-LQSLPLD-ARQSEEVLLTAAQSLFAVAILLD-------------LKISWKEASALFLLFIVQLLFPGVEVRYIISAI |
10 | 4k1cA | 0.12 | 0.08 | 3.01 | 1.00 | DEthreader | | ---------------------------------------QLSHTLTFLFNFLAIIPLAAILANATEELADKAG-----------------NT----G-GLLNATFGNAVELIVSIIALKK--GQ-VRIVQASMLGSLLSNLLLVLGLCFIFGGNRVQQTFN-QTAAQTMSSLLAIACASLLIPAAFRAIDILERGTSIVILIVYVLFLYFQLSHHALFEQQEEEVMSTIS----------------------------HSLSVKSSLVILLGTTVIISFCADFLVGTIDNVVESTGLSKTFIGLIVIPIVGNAAEHVTSVLVAM-KDKMDLALGVAIGSSLQVALFVTPFMVLVGWMID-----VPMTLN-FSTFETATLFIAVFLSNYLILD-GE------------SNWLEGVMSLAMYILIAMAFFYYPDE----- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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