Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCSSSSSSSSCCCCCSSSSSSSCCCSSSCCCSSSSSSSSSCCCCCSSSSSSSSSSSSSSSSSSSCCCCCCCSSSSSCCCCCCCCCSSSSSSSSSSCCCCCCCSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCSSSSSSSSSSSSSSSCCCCCSSSSSCSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSSHHHHHHHHCCCCCCCCCCCCC VQFAPEKPGPQPSAETTRHFLMSDRSLHLEASLDKELYYHGEPLNVNVHVTNNSTKTVKKIKVSVRQYADICLFSTAQYKCPVAQLEQDDQVSPSSTFCKVYTITPLLSDNREKRGLALDGKLKHEDTNLASSTIVKEGANKEVLGILVSYRVKVKLVVSRGGDVSVELPFVLMHPKPHDHIPLPRPQSAAPETDVPVDTNLIEFDTNYATDDDIVFEDFARLRLKGMKDDDYDDQLC |
1 | 1cf1C | 0.45 | 0.32 | 9.46 | 1.00 | DEthreader | | HAPDMGP-QPRAEASWQFFM--SDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLYSSDYYIKTVAAEEAQEKVPNSSLTKTLTLVPLLANNRERRGIALDG-KIKHEDTNLASST------DKTVMGILVSYQIKVKLTVSGLSEVATEVPFRLMHPQPEDPD-------------------------------------------------------- |
2 | 4zwjA4 | 0.59 | 0.43 | 12.42 | 2.15 | SPARKS-K | | --HAPPEMGPQPSAEASWQFFMSDKPLNLSVSLSKEIYFHGEPIPVTVTVTNNTDKVVKKIKVSVEQIANVVLYSSDYYVKPVASEETQEKVQPNSTLTKTLVLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDRTVMGILVSYHIKVKLTVSTSSEVATEVPFRLMHPQP------------------------------------------------------------ |
3 | 2wtrB | 0.75 | 0.55 | 15.71 | 1.05 | MapAlign | | VQYAPE-RPQPTAETTRQFL-MSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADICLFNTAQYKCPVAMEEADDTVAPSSTFCKVYTLTPFLANNREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIVSYKVKVKLVVSASSDVAVELPFTLMHPK------------------------------------------------------------- |
4 | 2wtrB | 0.71 | 0.61 | 17.18 | 0.77 | CEthreader | | VQYAPERP--QPTAETTRQFLMSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADICLFNTAQYKCPVAMEEADDTVAPSSTFCKVYTLTPFLANNREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIVSYKVKVKLVVSRSSDVAVELPFTLMHPKPKEEPLDTNDDDIVFEDFARQRLKGMK---------------------------------- |
5 | 2wtrB | 0.79 | 0.67 | 19.00 | 1.75 | MUSTER | | VQYAPERP--QPTAETTRQFLMSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADICLFNTAQYKCPVAMEEADDTVAPSSTFCKVYTLTPFLANNREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIVSYKVKVKLVVSRSSDVAVELPFTLMHPKPKEEPLD-------------------------TNDDDIVFEDFARQRLKGMK--------- |
6 | 1sujA | 0.62 | 0.50 | 14.31 | 4.24 | HHsearch | | VQFAPANLGVAPKTEITRQFMLSDRPLHLEASLDKEIYYHGEPINVNVKINNTTGKIVKKIKIIVEQVTDVVLFSLDKYVKTVCAEETNDTVAANSTLSKTFSVTPMLANNREKRGLALDGKLKHEDTNLASTTVIRPGMDKEVLGILVSYKVKVHLVVARSSDVAVELPLTLMHPKPS---------------------------------DDIIIEEFARQKL------------- |
7 | 4zwjA4 | 0.59 | 0.43 | 12.42 | 2.28 | FFAS-3D | | --HAPPEMGPQPSAEASWQFFMSDKPLNLSVSLSKEIYFHGEPIPVTVTVTNNTDKVVKKIKVSVEQIANVVLYSSDYYVKPVASEETQEKVQPNSTLTKTLVLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDRTVMGILVSYHIKVKLTVSTSSEVATEVPFRLMHPQP------------------------------------------------------------ |
8 | 4zwjA4 | 0.55 | 0.41 | 11.74 | 1.00 | EigenThreader | | --HAPPEMGPQPSAEASWQFFMSDKPLNLSVSLKEIYFHGE-PIPVTVTVTNNTDKVVKKIKVSVEQIANVVLYSSDYYVKPVASEETQEKVQPNSTLTKTLVLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDRTVMGILVSYHIKVKLTVSFLTSVATEVPFRLMHPQP------------------------------------------------------------ |
9 | 1jsyA | 0.82 | 0.67 | 18.85 | 3.56 | CNFpred | | VQYAPERPGPQPTAETTRQFLMSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADICLFNTAQYKCPVAMEEADDTVAPSSTFCKVYTLTPFLANNREKRGLALDGKLKHEDTNLASSTLLREGANREILGIIVSYKVKVKLVVS-SSDVAVELPFTLMHPK----------------------------------DDDIVFEDFARQRLKGM---------- |
10 | 2wtrB | 0.62 | 0.44 | 12.50 | 1.00 | DEthreader | | YAPER--PQ-PTAETTRQFLM-SDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADICLFNTAQYKCPVAMEEADDTVASSTFCKVYTLTPFLANNREKRGLALDG-KLKHEDTNLASST------NREILGIIVSYKVKVKLVVSRSSDVAVELPFTLMHPKPK----------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
|