>P30304 (291 residues) MELGPEPPHRRRLLFACSPPPASQPVVKALFGASAAGGLSPVTNLTVTMDQLQGLGSDYE QPLEVKNNSNLQRMGSSESTDSGFCLDSPGPLDSKENLENPMRRIHSLPQKLLGCSPALK RSHSDSLDHDIFQLIDPDENKENEAFEFKKPVRPVSRGCLHSHGLQEGKDLFTQRQNSAP ARMLSSNERDSSEPGNFIPLFTPQSPVTATLSDEDDGFVDLLDGENLKNEEETPSCMASL WTAPLVMRTTNLDNRCKLFDSPSLCSSSTRSVLKRPERSQEESPPGSTKRR |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | MELGPEPPHRRRLLFACSPPPASQPVVKALFGASAAGGLSPVTNLTVTMDQLQGLGSDYEQPLEVKNNSNLQRMGSSESTDSGFCLDSPGPLDSKENLENPMRRIHSLPQKLLGCSPALKRSHSDSLDHDIFQLIDPDENKENEAFEFKKPVRPVSRGCLHSHGLQEGKDLFTQRQNSAPARMLSSNERDSSEPGNFIPLFTPQSPVTATLSDEDDGFVDLLDGENLKNEEETPSCMASLWTAPLVMRTTNLDNRCKLFDSPSLCSSSTRSVLKRPERSQEESPPGSTKRR |
Prediction | CCCCCCCCCCCSSSSCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 998899971010243158998752233305687756677874156531565333578898875556655554568774345563047999889466543057777642677616880012578887667733358754565332230258899888776431125654333345899834431478887655422356632467888777777765145414643467887788328887514343467776665331379998754444101267788878887543579 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | MELGPEPPHRRRLLFACSPPPASQPVVKALFGASAAGGLSPVTNLTVTMDQLQGLGSDYEQPLEVKNNSNLQRMGSSESTDSGFCLDSPGPLDSKENLENPMRRIHSLPQKLLGCSPALKRSHSDSLDHDIFQLIDPDENKENEAFEFKKPVRPVSRGCLHSHGLQEGKDLFTQRQNSAPARMLSSNERDSSEPGNFIPLFTPQSPVTATLSDEDDGFVDLLDGENLKNEEETPSCMASLWTAPLVMRTTNLDNRCKLFDSPSLCSSSTRSVLKRPERSQEESPPGSTKRR |
Prediction | 873556342222001003233134301420132645442321130133053031125536434535546434426146324111102244344375436202420330254036330213353544552532422667543624423143234144443332344264551146346223432123364653435422322245231443655623000410457616567521310110000100244762352131141333224333300332621666744454458 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCSSSSCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC MELGPEPPHRRRLLFACSPPPASQPVVKALFGASAAGGLSPVTNLTVTMDQLQGLGSDYEQPLEVKNNSNLQRMGSSESTDSGFCLDSPGPLDSKENLENPMRRIHSLPQKLLGCSPALKRSHSDSLDHDIFQLIDPDENKENEAFEFKKPVRPVSRGCLHSHGLQEGKDLFTQRQNSAPARMLSSNERDSSEPGNFIPLFTPQSPVTATLSDEDDGFVDLLDGENLKNEEETPSCMASLWTAPLVMRTTNLDNRCKLFDSPSLCSSSTRSVLKRPERSQEESPPGSTKRR | |||||||||||||||||||
1 | 7kznD | 0.04 | 0.04 | 2.21 | 0.54 | CEthreader | VCWNPLYDDMFAVGYGSYEFLKQASGLINIYSLKNPSHPEYTFHTESGVMCVHFHPEFANLLAVGCYDGSVLVYDVRLKKDEPIYQASVRTGKLNDPVWQIYWQPDDAQKSLQFVSISSDGAVNLWTLTKSELIPECLMKLRVAAGGCCMDFCKMPGQESIYLVGTEEGAIHRCSKAYSSQYLSTYVSHHLAVYAVHWNNIHPSMFLSASCRLDHQAVGLCHDPKRAVMNFDLNDSIGDVSWAALQPTVFAAVTDDGRVHVFDLAQNKLLPLCSQKVVKKAKLTKLVFNPK | |||||||||||||
2 | 5ctqA | 0.07 | 0.07 | 2.75 | 0.53 | EigenThreader | KVRSVFERALSSVGLHMTKGLALWEAYREFESAIVEAARLEKVHSLFRRQLAIPLYDMEATFAEYEEWSEDPIPCLVPDLWIRYSQYLDRQLKVVLSVHNRAIRNCPWTVALWSRYLLAMERHGVFIQATDYVEIWQAYLDYLRRRVDFKQDSSESGDPSCVIMQNWARIEARLCNNMQKARELWDSIMTRGNAKYANMWLEYYNLERAHGDTQHCRKALHRAVQCT----SDYPEHVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRMKAAEKEAALVQQEEEKA | |||||||||||||
3 | 3c5bA | 0.10 | 0.10 | 3.56 | 0.47 | FFAS-3D | MLIGQTLPSLLDIYNRTDKNGRIARIVEQLAKTNDILTDAIYVPCNDGSKHKTTIRAGIPEPVWRRYNQGVQPTKTQTVTDTTGMLYDLGFVDAAFRVSENMGKLQGFPEAFMGLAPRFNTLSTSKAASAENVFSAGGSGSTNTSIWFMSWGENTPEGMVAGFQHEDLGDDLVSDGNGGQFRAYRDEFKWDIGLSVRDWRSISRTKDASTGADLISMMVDAYYARDVAMLGDANKTIHAWLHKQAMNAKNVNLTIEEYGGKKGIP-------IRRVDAILNTESAVTA--- | |||||||||||||
4 | 4btgA3 | 0.13 | 0.12 | 4.08 | 1.26 | SPARKS-K | NQLSVGALQLPL-QFTRTFSASMTSEVGRTATYPFDAVVSSVLTILGRLWSPS-------TPKELDPSARLRNTGRAEVIFSDEELSSPWFIEAMSEVSPFKLR---PINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFT---PVKLANNSNQRFLDVEPGRMSATLAPI---------GNTRGTVNSNGAEMTLGFPSVVEALDRDPMVAIAALRTGIVDESLEMFNYYAAVMHYAVAHQGVAAEQGSYLVRIPVGYNAIEAIAYNKPIQPSEVLQAKVLDLA | |||||||||||||
5 | 3p8cB | 0.05 | 0.03 | 1.63 | 0.67 | DEthreader | ---------KKACGDPAK-L--T---FLITYTL-------S--ALSFRDEVFHIHKAERKEVGMPKAFIDKHIAEIFYMEELRHVMQYFDFRGMRLDFRKSEMETSD-----------SQSRYS-MAQARNLITDICTCSSVRYITLYWYTRQSNGA-QVLLVNVDLLFKRLSSV--D--SV-L--------------KRMTIIGVIL-------SFRSLAQEALRSLPCEIDPALVVALS-S------------SPEEEYKIACLLMVFVALPLSNVMKT---------- | |||||||||||||
6 | 1gjqA | 0.05 | 0.05 | 2.28 | 0.92 | MapAlign | -RKGATGKPLTPDITQQRGQQYLEALITYGTPLGMPNWGSSGELQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRL----SALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLITPTGKFNVYNTQHDVY | |||||||||||||
7 | 6etxG | 0.11 | 0.11 | 3.87 | 0.78 | MUSTER | MQFHPELFERQETWSPFHISLKPYHISKFIYRHGQIRVFN--HSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDR-SAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGK | |||||||||||||
8 | 6tbmC | 0.10 | 0.03 | 1.03 | 0.75 | HHsearch | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDSLSNPLNNCDRPILQSCLS-KHI-KHQVLDGVAKSYPLPLERKIMPARSRSSFLRMREMFALYSRTAVIDVDRAGDYYFSVRAP-- | |||||||||||||
9 | 1hj5A | 0.05 | 0.05 | 2.30 | 0.52 | CEthreader | QVDLMANYLLLDPAAPPEFGMKEMRESWKVHVAPEDRPTQQENDWDLENLFSVTLRDAGQIALIDGATYEIKSVLDTGYAVHIIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSAGAYWPPQYVLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLDNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPN | |||||||||||||
10 | 4kvmA | 0.09 | 0.09 | 3.30 | 0.48 | EigenThreader | KKVLDRVAFLETRAEYELYLSKMEEAKSTIYLLLDRNPDNHQYYYNLQRAYGYEDASGKVLDSAEWLNLYSQLAKRYPKSESLSTTNKFSEDDD-----NSQIEIPTTLLWTYYFLAQHFDHVGELEKAEKYVDLAIDHTPTLVELFMTKARISKHKGELQTAMEIMDHARKLDLQDRFINGKCAKYMLRNDETVSLFTRNEAVGGAVGDLADMQCLWYMLEDGKSFARQKKFALALKRFSTVFKIFDTWADDQFDPFAKYSPKLPDFEKLSSGEINRKYDEDPLGENLVA | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |