Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 500 520 540 560 580 600 620 640
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| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCSSSSSCCCCCHHHHHHHHHCCCSSCCCCCCCCSSSSSSCCCCCHHHHHHHHHHHHHHCCCCSSSSCCCHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCSSSSSCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHSCCCCCCCSSSSCCCCCSSSSSCCCCCCCHHHHHHHHHHHHCCCCSSSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCCCCCCCCCCCCCCCSSSSSSSSCCCCCCCCCCCCCCCCSSSCCCCCCCCCCCSSSSCCCCCSSSCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCHHHHHHHHHCCCCCCCCCSSSCCCCCCCCCCCCCCSSSSSSSSSSSCCCCCCCSSSSSSSSSSSSSSCCCCCCSSSSSSCCCCCSSSSSSCCCCCCCCCCCCCCCSSSSSCCCCCCCCSSSSSSSSCCCCCCCCCCCSSSSSSSSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCC MPPRAPPAPGPRPPPRAAAATDTAAGAGGAGGAGGAGGPGFRPLAPRPWRWLLLLALPAACSAPPPRPVYTNHWAVQVLGGPAEADRVAAAHGYLNLGQIGNLEDYYHFYHSKTFKRSTLSSRGPHTFLRMDPQVKWLQQQEVKRRVKRQVRSDPQALYFNDPIWSNMWYLHCGDKNSRCRSEMNVQAAWKRGYTGKNVVVTILDDGIERNHPDLAPNYDSYASYDVNGNDYDPSPRYDASNENKHGTRCAGEVAASANNSYCIVGIAYNAKIGGIRMLDGDVTDVVEAKSLGIRPNYIDIYSASWGPDDDGKTVDGPGRLAKQAFEYGIKKGRQGLGSIFVWASGNGGREGDYCSCDGYTNSIYTISVSSATENGYKPWYLEECASTLATTYSSGAFYERKIVTTDLRQRCTDGHTGTSVSAPMVAGIIALALEANSQLTWRDVQHLLVKTSRPAHLKASDWKVNGAGHKVSHFYGFGLVDAEALVVEAKKWTAVPSQHMCVAASDKRPRSIPLVQVLRTTALTSACAEHSDQRVVYLEHVVVRTSISHPRRGDLQIYLVSPSGTKSQLLAKRLLDLSNEGFTNWEFMTVHCWGEKAEGQWTLEIQDLPSQVRNPEKQGKLKEWSLILYGTAEHPYHTFSAHQSRSRMLELSAPEL |
1 | 1p8jA | 0.58 | 0.41 | 11.81 | 1.17 | DEthreader | | -------------------------------------------------------------------------------------------------------------------------------------------------------------QEPTDPKFPQQWYLSG-V-T---QRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDEVTDAVEARSLGL-NPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIVEILVEPKDIGK--RLEVRKAVTACLGE-PNHITRLEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENT-SE-AN--NYGTLTKFTLVLYGTAPEGL-------------------- |
2 | 1p8jA | 0.59 | 0.42 | 12.10 | 3.51 | SPARKS-K | | -----------------------------------------------------------------------------------------------------------------------------------------------------------VYQEPTDPKFPQQWYLSGVTQR-----DLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIVEILVEPKDIG--KRLEVRKAVTAC-LGEPNHITRLEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTSE----ANNYGTLTKFTLVLYGTAPEGL-------------------- |
3 | 1p8jA | 0.57 | 0.41 | 11.68 | 1.47 | MapAlign | | ------------------------------------------------------------------------------------------------------------------------------------------------------------YQEPTDPKFPQQWYLSG-----VTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGTDAVEARSLGLNP-N-HIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIVEILVEPKDI-G-KRLEVRKAVTACLGE-PNHITRLEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTS----EANNYGTLTKFTLVLYGTAPE---------------------- |
4 | 1p8jA | 0.59 | 0.42 | 12.06 | 0.72 | CEthreader | | -----------------------------------------------------------------------------------------------------------------------------------------------------------VYQEPTDPKFPQQWYLS-----GVTQRDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIVEILVEPKD--IGKRLEVRKAVTACLGEP-NHITRLEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTSEANNY----GTLTKFTLVLYGTAPEGL-------------------- |
5 | 1p8jA | 0.59 | 0.42 | 12.10 | 2.35 | MUSTER | | -----------------------------------------------------------------------------------------------------------------------------------------------------------VYQEPTDPKFPQQWYLSGVTQR-----DLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIVEILVEPKDIG--KRLEVRKAVTACLG-EPNHITRLEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTSEA----NNYGTLTKFTLVLYGTAPEGL-------------------- |
6 | 3hjrA | 0.26 | 0.19 | 5.87 | 2.87 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------------GCAPLTGKESGMDI--------GRSSTERCLPGANPLQDQQWYLLNSGQDGIAGNDLNLWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNVRP-GSKNVVTGSDDPTPTD---PDTAHGTSVSGIIAAV-DNAIGTKGIAPRAQLQGFNLLDDLQKDWLYALGDSNASRDNRVFNQSYGMSVVPRSANSLDQSQLDRLFEQQT--LKAQGAAYIKAAGNGFNKIANRNLDPSNSNFWNLVVSALNADGVRSSYSSVGSNIFLSATGGEYGDTPAMVTTDLPCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKLEGWERNAAGMWFSPTYGFGLIDVNKALELAANHQPLPPLVQLPWQKTGSAAAIADVGPTSSTTRI--------ATPLTVEAVQVMVSLDHQRLPDLLIELVSPAGTRSILLSPFNSLVRTKGLRDMRMLSNKFYGESAQGTWRLEVTDVANGTRNNRQPGKLISWSLRVLGH------------------------- |
7 | 1p8jA | 0.59 | 0.42 | 11.97 | 3.41 | FFAS-3D | | --------------------------------------------------------------------------------------------------------------------------------------------------------------EPTDPKFPQQWYLSGVTQ-----RDLNVKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIVEILVEPKDIGKR---LEVRKAVTACLGEPNHITRLEHVQARLTLSYNRRGDLAIHLISPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPAGEWVLEIENTSEA----NNYGTLTKFTLVLYGTAPEG--------------------- |
8 | 6hlbA | 0.54 | 0.38 | 10.98 | 1.67 | EigenThreader | | -----------------------------------------------------------------------------------------------------------------------------------------------------VYQEP----TDPKFPQ-------QWYLSGVTQRDLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYD--PGASFNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDVTDAVEARSLG--LNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNANDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIIDILTEPKDIGK--RLEVRKTVT-ACLGEPNHITRLEHAQARLTLSYNRRGDLAIHLVSPMGTRSTLLAARPHDYSADGFND--WAFMTTHSWDEDPSWVLEIENTSE----ANNYGTLTKFTLVLYGTAS----------------------- |
9 | 4omcA | 0.60 | 0.42 | 12.17 | 5.79 | CNFpred | | ------------------------------------------------------------------------------------------------------------------------------------------------------------YQEPTDPKFPQQWYLSGVT-----QRDLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNANDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIIDILTEPKDIG--KRLEVRKTVTACLGE-PNHITRLEHAQARLTLSYNRRGDLAIHLVSPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPSGEWVLEIENTSEA----NNYGTLTKFTLVLYGTA------------------------ |
10 | 6hlbA | 0.59 | 0.41 | 11.84 | 1.17 | DEthreader | | -------------------------------------------------------------------------------------------------------------------------------------------------------------QEPTDPKFPQQWYLSG-V-T-Q-R-DLNVKAAWAQGYTGHGIVVSILDDGIEKNHPDLAGNYDPGASFDVNDQDPDPQPRYTQMNDNRHGTRCAGEVAAVANNGVCGVGVAYNARIGGVRMLGEVTDVEARSLGL--NPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQFGNVPWYSEACSSTLATTYSSGNQNEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNANDWATNGVGRKVSHSYGYGLLDAGAMVALAQNWTTVAPQRKCIIDILTEPKDIGK--RLEVRKTVTACLGE-PNHITRLEHAQARLTLSYNRRGDLAIHLVSPMGTRSTLLAARPHDYSADGFNDWAFMTTHSWDEDPSGEWVLEIENT-SE-A-N-NYGTLTKFTLVLYGTA-S---------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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