Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| SS Seq | CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCSCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCSSSSCCCCCCCCSSSSCCCCCHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC MDWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKFIKGEIKSEFKDIEEIKTQKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYCSGKSKKPV |
1 | 6m04A | 0.09 | 0.08 | 3.06 | 1.17 | DEthreader | | --L-DIQP-TY--RIL-KPWWDVFMDYLAVVMLMVAIFAGTMQLTKD-Q-VVCLLFQVFINQMCYHLLPWKYFPYLALIHTIILMVSSNFWFKY-PKTCSKVEH--------ALFEKVRKFRAHVEDS-DLIYKLYVVQTVIKTAKFIFILCYTAN-FVNAISFEHVCKPKVLIGYVFECTHNMAYMLKKLLISYISIICVYGFICLYTLFWLFRI-PLKEYSFER |
2 | 2zw3A | 0.99 | 0.88 | 24.54 | 6.78 | SPARKS-K | | -DWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKF---------------IKGKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRY--------- |
3 | 2zw3A | 0.94 | 0.82 | 22.97 | 1.32 | MapAlign | | ---TLQTILG-GVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRK---------------FIKGKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLI----------- |
4 | 2zw3A | 0.99 | 0.88 | 24.66 | 1.16 | CEthreader | | -DWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKFI---------------KGKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRY--------- |
5 | 2zw3A | 0.98 | 0.87 | 24.42 | 3.78 | MUSTER | | -DWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRK---------------FIKGKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRY--------- |
6 | 2zw3A | 0.99 | 0.88 | 24.66 | 7.01 | HHsearch | | -DWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKFI---------------KGKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRY--------- |
7 | 2zw3A | 0.98 | 0.87 | 24.30 | 2.78 | FFAS-3D | | -DWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRK---------------FIKGKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIR---------- |
8 | 2zw3A | 1.00 | 0.88 | 24.78 | 1.45 | EigenThreader | | -DWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIRLWALQLIFVSTPALLVAMHVAYRRHEKKRKFIK---------------GKVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRY--------- |
9 | 6mhyA | 0.59 | 0.46 | 13.33 | 1.91 | CNFpred | | GDWSFLGNILEEVNEHSTVIGRVWLTVLFIFRILILGTAADFVWGDEQSDFVCNTQQPGCENVCYDEAFPISHIRLWVLQIIFVSTPSLVYVGHAV-----------------------------------LLRTYVCHIIFKTLFEVGFIVGHYFLY-GFRILPLYRCSRWPCPNVVDCFVSRPTEKTIFILFMLSVASVSLFLNILEMSHL------------- |
10 | 6m04A1 | 0.09 | 0.08 | 3.06 | 1.17 | DEthreader | | --L-DIQP-TY--RIL-KPWWDVFMDYLAVVMLMVAIFAGTMQLTKD-Q-VVCLLFQVFINQMCYHLLPWKYFPYLALIHTIILMVSSNFWFKY-PKTCSKVEH--------ALFEKVRKFRAHVEDS-DLIYKLYVVQTVIKTAKFIFILCYTAN-FVNAISFEHVCKPKVLIGYVFECTHNMAYMLKKLLISYISIICVYGFICLYTLFWLFRI-PLKEYSFER |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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