>P28698 (239 residues) TPPRTMQESPLGLQVKEESEVTEDSDFLESGPLAATQESVPTLLPEEAQRCGTVLDQIFP HSKTGPEGPSWREHPRALWHEEAGGIFSPGFALQLGSISAGPGSVSPHLHVPWDLGMAGL SGQIQSPSREGGFAHALLLPSDLRSEQDPTDEDPCRGVGPALITTRWRSPRGRSRGRPST GGGVVRGGRCDVCGKVFSQRSNLLRHQKIHTGERPFVCSECGRSFSRSSHLLRHQLTHT |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | TPPRTMQESPLGLQVKEESEVTEDSDFLESGPLAATQESVPTLLPEEAQRCGTVLDQIFPHSKTGPEGPSWREHPRALWHEEAGGIFSPGFALQLGSISAGPGSVSPHLHVPWDLGMAGLSGQIQSPSREGGFAHALLLPSDLRSEQDPTDEDPCRGVGPALITTRWRSPRGRSRGRPSTGGGVVRGGRCDVCGKVFSQRSNLLRHQKIHTGERPFVCSECGRSFSRSSHLLRHQLTHT |
Prediction | CCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCHHHHHCCCCCCCCSCCCCCCCSCCCCCCCCCCCCCCCCSCCCCCHHHHSHCCCCCCCSCCCCCCCSCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCSCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCSSCCCCCHHHHCCCCC |
Confidence | 99764323458988832666799854034565023313347988802687766203232223335787752456651221001367489127878763257655512024687578787754883882158887642354555110366898681001743256655554534112552799999895158888764343331011133368898127988874144332111112267 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | TPPRTMQESPLGLQVKEESEVTEDSDFLESGPLAATQESVPTLLPEEAQRCGTVLDQIFPHSKTGPEGPSWREHPRALWHEEAGGIFSPGFALQLGSISAGPGSVSPHLHVPWDLGMAGLSGQIQSPSREGGFAHALLLPSDLRSEQDPTDEDPCRGVGPALITTRWRSPRGRSRGRPSTGGGVVRGGRCDVCGKVFSQRSNLLRHQKIHTGERPFVCSECGRSFSRSSHLLRHQLTHT |
Prediction | 86654144224444314056126521033414044132113443324065013204313515433513220244340340322101022144644121022424044422130406401331445321405510110335140413330322325744110023444334403414211123555240515241203334140341234305033144664120233423034234458 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCHHHHHCCCCCCCCSCCCCCCCSCCCCCCCCCCCCCCCCSCCCCCHHHHSHCCCCCCCSCCCCCCCSCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCSCCCCCCSSCCCCCCCCSCCCCCCCCCSCCCCCCCSSCCCCCHHHHCCCCC TPPRTMQESPLGLQVKEESEVTEDSDFLESGPLAATQESVPTLLPEEAQRCGTVLDQIFPHSKTGPEGPSWREHPRALWHEEAGGIFSPGFALQLGSISAGPGSVSPHLHVPWDLGMAGLSGQIQSPSREGGFAHALLLPSDLRSEQDPTDEDPCRGVGPALITTRWRSPRGRSRGRPSTGGGVVRGGRCDVCGKVFSQRSNLLRHQKIHTGERPFVCSECGRSFSRSSHLLRHQLTHT | |||||||||||||||||||
1 | 2zxqA | 0.05 | 0.04 | 1.79 | 0.83 | DEthreader | -------------IPEGNGV--EENAHRTVTKYTVAILAGSRVRF-FIYLDV--WGNLTSSGS----------TEWGSGNEYDS--QHWYGTSKGENSMRFRNHQK--DSWVGD--YPQYGGAAN-APLL--GG-YNMKDFEWRNDYYIKNLYTHDVVSAGDGS----------IKAYNSNTSFQDAQGIW-PFVVSVEDNRIHLSVKVYFDYQSGSDDI-NLKKIYSTATAPD----- | |||||||||||||
2 | 5v3jE | 0.22 | 0.19 | 6.08 | 5.12 | SPARKS-K | SHHQKLHVGEKPYKCQECGKA-----FPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSRHQRIHTGE-----KPH--KCKECGKAFRDTQLSLHLLTHAGAR--------RFECKDCDKVYSCKCKECGKGFISDSHLLRHQ-SVHTGETPYKCKECGKGFRRG-----SELARHQRAHSGDKPY--KCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHS | |||||||||||||
3 | 5v3jE | 0.19 | 0.18 | 5.81 | 1.05 | MapAlign | -PSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSHL----LRHQRIHTGEKPHKCKECGKAFRDTQLSLHLLFECKDCDKVYSCASQLALHQMSHTGEKPHKCKECGKGFISDSHLLRHQSVHTGETPYKCKECGKG------FRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHTGDRPHKCKECGKAFIRRSELTHHERSHS | |||||||||||||
4 | 5v3jE | 0.24 | 0.21 | 6.53 | 0.84 | CEthreader | -----------PHKCKECGKA-----FHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNAQLSLHHR----VHTDEKCFECKECGKAFMPSHLLRHQRIHTGEKPHRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALH-QMSHTGEKPHKCKECGKGFIS-----DSHLLRHQSVHTGETPY--KCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHT | |||||||||||||
5 | 5v3jE | 0.22 | 0.21 | 6.61 | 2.62 | MUSTER | SQLSHHQKLHVGEKPYKCQECG--KAFPSNAQLSLHHRVHTDEKCFECKECGKAFMRPSRHQRIKECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQEKPHKCKECGKGFIGETPYKCKECGKGFRRGSELARAHSGDKPYKCKECGKSFTCT----TELFRHQKVHTGD---RPHKCKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT | |||||||||||||
6 | 5v3jE | 0.22 | 0.20 | 6.18 | 2.05 | HHsearch | SLHHRVHTDEKCFECKECGKA-----FMRPSHLLRHQRIHTGEKPHKCKECGKAFRYDTLHLLAG-------ARRF--ECKDCDKVYSCASLALHQMSHTGE--------KPHKCKECGKGFIYKCKECGKGFRRGSELARH-QRAHSGDKPYKCKECGKSFTC-----TTELFRHQKVHTGDRPHK--CKECGKAFIRRSELTHHERSHSGEKPYECKECGKTFGRGSELSRHQKIHT | |||||||||||||
7 | 5undA | 0.19 | 0.13 | 4.32 | 1.44 | FFAS-3D | ------------------------------------------EKPFKCSMCDYASVEVS----------KLKRHIRSHTGE------RPFQCSLCSYASRDTYKLKRHMRTHSGEK------PYECYICHARFTQSGTMKMHILQKHTE-NVAKCPHCDTVIA----RKSDLGVHLRKQHSY-IEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHT | |||||||||||||
8 | 5v3jE | 0.12 | 0.10 | 3.73 | 0.62 | EigenThreader | ------------PHKCKECGKAFHTPSQLSHHQKLHVGE---KPYKCQECGKAFPSNAQLSLHHRVHTDEKCFKECGKARPSHLLRHQRIHTGEKPHKC-------KECGKAFRYDTQLSLHLLTHAGARRFECKDCDKVYSCASQLALHQMSHTG-EKPHKCKECGKGFSDSHLLRHQSVHTGETPYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCHTGDRPHKCKEC | |||||||||||||
9 | 5v3mC | 0.25 | 0.21 | 6.48 | 8.50 | CNFpred | -----------PHKCKECGK-----AFHTPSQLSHHQKLHVGEKPYKCQECGKAFPSNALHHRVHT--------EKCFECKECGKAFMPSHLLRHQRIHT--------GEKPHKCKECGKAFR-ECKDCDKVYSCASQLALHQM-SHTGEKPHKCKECGKGFISD-----SHLLRHQSVHTGET--PYKCKECGKGFRRGSELARHQRAHSGDKPYKCKECGKSFTCTTELFRHQKVHT | |||||||||||||
10 | 6yj6A | 0.07 | 0.05 | 2.24 | 0.83 | DEthreader | ----VDYDRIEDELMKVFNANKCIP--FDWSSLNILAELFLLAVSEV-----DD-VRLGLLRLNTD--N-LVEALHF-----YFEAAALKYKEAIFT---TD--K---PLARCYKEIESYETAEFYISLAEVYYRKKSRSRKFVGILRT-QEGP-LMEERV------SVVETAQEVFFRV--MKFVKLAI--------ENLGLLNFQFNRLQFLQAFDSCRYN-G-ASITN-KE----- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |