>P28482 (140 residues) MAAAAAAGAGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDAPFKFDMELDDLPK EKLKELIFEETARFQPGYRS |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MAAAAAAGAGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDAPFKFDMELDDLPKEKLKELIFEETARFQPGYRS |
Prediction | CCCCCCCCCCSSSSCCSSSSCCCCSSSSSSSCCCCCSSSSSSSSCCCCCSSSSSSSCCCCCCHHHHHHHHHHHHHHHCCCCCSCCSSSSSCCCCCCCCCSSSSSSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC |
Confidence | 99988998605998897876167748867611245669999998899979999961476773047999999999987699876325677648985458579999606211010436999899899999999998576439 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 | | | | | | | MAAAAAAGAGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDAPFKFDMELDDLPKEKLKELIFEETARFQPGYRS |
Prediction | 84555676433240453414047316414412510101001031474643000110454665420320020020045061610030330031753741420000000323212545704662011001020232234168 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCSSSSCCSSSSCCCCSSSSSSSCCCCCSSSSSSSSCCCCCSSSSSSSCCCCCCHHHHHHHHHHHHHHHCCCCCSCCSSSSSCCCCCCCCCSSSSSSCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC MAAAAAAGAGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDAPFKFDMELDDLPKEKLKELIFEETARFQPGYRS | |||||||||||||||||||
1 | 5z33A | 0.31 | 0.28 | 8.41 | 1.17 | DEthreader | -----GR--KIFKVFNQDFIVDERYTVTKELGQGAYGIVCAAVNNQTSEGVAIKKVTVFSKKILAKRALREIKLLQHFGHRNITCLYDMDIPRPDN-FNETYLYEELMECDLAAIIR----KGN-CDFG-LAR-GFSCTT | |||||||||||||
2 | 3i5zA2 | 0.95 | 0.87 | 24.44 | 1.87 | SPARKS-K | -------GAGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLKFDMEL--DDLPKEKLKELIFEETARFQPG--- | |||||||||||||
3 | 1q99B | 0.21 | 0.18 | 5.68 | 0.47 | MapAlign | -----------YHPAFKGEPYKARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNANHILKLLDHFNHKG-PNGVHVVMVFEVLLFEPDEGHSYTKDDDHIAQIIELLGE------ | |||||||||||||
4 | 2pziA1 | 0.15 | 0.15 | 5.04 | 0.28 | CEthreader | WCPYCGSPYSFLPQLNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK-QKLPVAEAIAYLLEILPALSYLHSI | |||||||||||||
5 | 3i5zA2 | 0.95 | 0.87 | 24.44 | 1.87 | MUSTER | -------GAGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLKFDMEL--DDLPKEKLKELIFEETARFQPG--- | |||||||||||||
6 | 6ygnA | 0.15 | 0.14 | 4.54 | 0.69 | HHsearch | SKPSEPSPTITSMTKASHSSTYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESM-----EELVMIFEF----------ISGLDIFERINTSAFELNEREIV | |||||||||||||
7 | 3i5zA2 | 0.95 | 0.86 | 24.25 | 2.04 | FFAS-3D | -------GAGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLKFDMELD--DLPKEKLKELIFEETARFQPG--- | |||||||||||||
8 | 3itzA1 | 0.30 | 0.30 | 9.10 | 0.65 | EigenThreader | MLEMSQERPTFQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPASLEEFNDVYLVTHLMGADLNNIVKCQKYIHSAAQALAHAYFAQYHDP | |||||||||||||
9 | 3teiA | 0.81 | 0.70 | 19.76 | 1.69 | CNFpred | ---------GPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLQHLSNDHICYFLYQI---------- | |||||||||||||
10 | 3i5zA | 0.81 | 0.72 | 20.36 | 1.17 | DEthreader | -------GAGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK----KSN-DFGL-AR--VK-AAP | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |