Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC TPKPRPPRPLPVAPGSSKTEADVEQQALTLPDLAEQFAPPDIAPPLLIKLVEAIEKKGLECSTLYRTQSSSNLAELRQLLDCDTPSVDLEMIDVHVLADAFKRYLLDLPNPVIPAAVYSEMISLAPEVQSSEEYIQLLKKLIRSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARVLSEIFSPMLFRFSAASSDNTENLIKVIEILISTEWNER |
1 | 3byiA | 0.22 | 0.20 | 6.41 | 1.33 | DEthreader | | -------------RP-LTLQEIKDQFGSHLHKVCERENS--TVPWFVKQCIEAVEKRGLDVDGIYRVSGLATIQKLRFIVNQEE-KLNLDSWDIHVVTGALKMFFRELPEPLFPYSFFEQFVEAIK-KQDNNTRIEAVKSLVQK--LPPPNRDTMKVLFGHLTKIVAKASKNLMSTQSLGIVFGPTLLRANENMAIHMVYQNQIAELMLSEYSKIG |
2 | 1pbwB | 1.00 | 0.87 | 24.24 | 2.03 | SPARKS-K | | -----------------------------LPDLAEQFAPPDIAPPLLIKLVEAIEKKGLECSTLYRTQSSSNLAELRQLLDCDTPSVDLEMIDVHVLADAFKRYLLDLPNPVIPAAVYSEMISLAPEVQSSEEYIQLLKKLIRSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARVLSEIFSPMLFRFSAASSDNTENLIKVIEILISTEWNER |
3 | 3cxlA | 0.25 | 0.22 | 6.88 | 1.47 | MapAlign | | ---------------------VKKVYSCDLTTLVKAH--TTKRPMVVDMCIREIESRGLNSEGLYRVSGFDLIEDVKMAFDRDGEKADISMYDINIITGALKLYFRDLPIPLITYDAYPKFIESAK-IMDPDEQLETLHEALK--LLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELDANDIRYQRLVVELLIKNEDIL- |
4 | 3cxlA | 0.23 | 0.22 | 6.98 | 0.95 | CEthreader | | LNVHKQCSKMVPNDCKPDLKHVKKVYSCDLTTLVKAH--TTKRPMVVDMCIREIESRGLNSEGLYRVSGSDLIEDVKMAFDRDGEKADISVEDINIITGALKLYFRDLPIPLITYDAYPKFIESAKI-MDPDEQLETLHEALK--LLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELDANDIRYQRLVVELLIKNEDILF |
5 | 1pbwB | 1.00 | 0.87 | 24.24 | 2.04 | MUSTER | | -----------------------------LPDLAEQFAPPDIAPPLLIKLVEAIEKKGLECSTLYRTQSSSNLAELRQLLDCDTPSVDLEMIDVHVLADAFKRYLLDLPNPVIPAAVYSEMISLAPEVQSSEEYIQLLKKLIRSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARVLSEIFSPMLFRFSAASSDNTENLIKVIEILISTEWNER |
6 | 3cxlA | 0.24 | 0.23 | 7.21 | 2.68 | HHsearch | | HKQCSKMVPNDCKPDLK---HVKKVYSCDLTTLVKAHT--TKRPMVVDMCIREIESRGLNSEGLYRVSGFDLIEDVKMAFDRDGEKADINMYDINIITGALKLYFRDLPIPLITYDAYPKFIESA-KIMDPDEQLETLHEALK--LLPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPELDLNDIRYQRLVVELLIKNEILF- |
7 | 1pbwB | 1.00 | 0.87 | 24.24 | 2.59 | FFAS-3D | | -----------------------------LPDLAEQFAPPDIAPPLLIKLVEAIEKKGLECSTLYRTQSSSNLAELRQLLDCDTPSVDLEMIDVHVLADAFKRYLLDLPNPVIPAAVYSEMISLAPEVQSSEEYIQLLKKLIRSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARVLSEIFSPMLFRFSAASSDNTENLIKVIEILISTEWNER |
8 | 2ee5A | 0.24 | 0.23 | 7.08 | 1.80 | EigenThreader | | ---GSSGSSGKNFNPPTRRNWESNYFGMPLQDLVT---AEKPIPLFVEKCVEFIEDTGLCTEGLYRVSGNKDQDNIQKQFDQDHNINLVSMEVVNAVAGALKAFFADLPDPLIPYSLHPELLEAAK-IPDKTERLHALKEIV--KKFHPVNYDVFRYVITHLNRVSQQHKINLMTADNLSICFWPTLMRPDFENRSTTKIHQSVVETFIQQCQFFF |
9 | 1pbwA | 1.00 | 0.85 | 23.85 | 1.54 | CNFpred | | -----------------------------LPDLAEQFAPPDIAPPLLIKLVEAIEKKGLECSTLYRTQSSSNLAELRQLLDCDTPSVDLEMIDVHVLADAFKRYLLDLPNPVIPAAVYSEMISLAPEVQSSEEYIQLLKKLIRSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARVLSEIFSPMLFRFSAASSDNTENLIKVIEILISTEW--- |
10 | 3cxlA | 0.25 | 0.23 | 7.05 | 1.33 | DEthreader | | ------------TTLMPVLCGLNKVYSCDLTTLVKAHTT--KRPMVVDMCIREIESRGLNSEGLYRVSGFDLIEDVKMAFDRDGEKADISNYDINIITGALKLYFRDLPIPLITYDAYPKFIESAK-IMDPDEQLETLHEALKL--LPPAHCETLRYLMAHLKRVTLHEKENLMNAENLGIVFGPTLMRSPAAALNDIRYQRLVVELLIKNEDILF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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