>P25024 (350 residues) MSNITDPQMWDFDDLNFTGMPPADEDYSPCMLETETLNKYVVIIAYALVFLLSLLGNSLV MLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVN FYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHP NNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKHRA MRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCL NPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYTSSSVNVSSNL |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | MSNITDPQMWDFDDLNFTGMPPADEDYSPCMLETETLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYTSSSVNVSSNL |
Prediction | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCCCCSHHSHHHHHHHHHHHHHHHHHHHHSSSSCCCCSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 99888898888777788889998888777656606688986999999999999988999999887536778667889999999999999989999999822997321999999999999999999999999997040021045334455631110129999999999979999743588289869983469974157889999999999999999999999999999998668865423899999999999999758999999999998378889747899999999999999999776778877740988999999997451577744455556777666788888889 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | MSNITDPQMWDFDDLNFTGMPPADEDYSPCMLETETLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYTSSSVNVSSNL |
Prediction | 65042344333233212232234443333143434401100002112200230231121000000113442100000000001000000000101000002202012000000101132001000000000030000000000202433321000000000000000000100002024475322000010357322010001111123122311210220001000101435455220000000000001120312110000010013141144313123002001110100013401230010010156104201300322323457334554444444444545555 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCCCCSHHSHHHHHHHHHHHHHHHHHHHHSSSSCCCCSSSSSCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC MSNITDPQMWDFDDLNFTGMPPADEDYSPCMLETETLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYTSSSVNVSSNL | |||||||||||||||||||
1 | 5wb1A | 0.30 | 0.26 | 7.81 | 1.33 | DEthreader | --------------------------P-CVFTDVLNQSKPVTLFLYGVVFLFGSIGNFLVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLDHNSLASVPCTLLTACFYVAMFASLCFITEIALDRYYAIVYM-RY--RPVKQACLFSIFWWIFAVIIAIPHFMVVTK-KD-N--QCM-TDYDYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQSRHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE-FRLV--PR-G------A-KQRELVAVD | |||||||||||||
2 | 4mbsA1 | 0.32 | 0.27 | 8.09 | 2.06 | SPARKS-K | ---------------------------PCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINYKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARVTFGVVTSVITWVVAVFASLPNIIFTRSQKEG-LHYTCSSHFPYQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRMEEKKRHRDVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNC-SSSNRLDQAMQVTETLGMTHCCINPIIYAFVGEEFRNYLLVFFQ----------------------------- | |||||||||||||
3 | 4n6hA | 0.27 | 0.24 | 7.45 | 0.61 | MapAlign | GKVKEAQAAAEQLKTTRNAYIQKYLGSPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRPAKAKLINICIWVLASGVGVPIMVMAVTRPR-DGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTL-------VDIDRRPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCR----------------------------- | |||||||||||||
4 | 4n6hA | 0.26 | 0.24 | 7.31 | 0.34 | CEthreader | GKVKEAQAAAEQLKTTRNAYIQKYLGSPGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMEWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRPAKAKLINICIWVLASGVGVPIMVMAVTRPR-DGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRD------PLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG------------------------- | |||||||||||||
5 | 2lnlA | 1.00 | 0.85 | 23.68 | 1.69 | MUSTER | ----------------------------PCMLETETLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG-------------------------- | |||||||||||||
6 | 6lflA | 0.85 | 0.67 | 19.00 | 1.32 | HHsearch | ------------------------------------INKYFVVIIYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGIWLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPVLLFRRTVYSSNVSPACYED-----ANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFKAGSGQKHREMRVIFAVVLIFLLCWLPYNLVLLADTLMRT---------RNHIDRALDATEILAILHSCLNPLIYAFIGQKFRHGLLKILAIHGLIS----------------------- | |||||||||||||
7 | 6wwzR | 0.42 | 0.37 | 10.74 | 3.15 | FFAS-3D | ---------------------SVDSEMLLCSLQERQFSRLFVPIAYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTLPFWAVSHAGAWVFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFSRTLPRSKIICLVVWGLSVIISSSTFVFNQKYNTQGSDVCEPKYQVSEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLVTAA-NLGKMNRSCQSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWC------------------------- | |||||||||||||
8 | 6wwzR | 0.41 | 0.35 | 10.27 | 1.00 | EigenThreader | -------------------YSVDSEMLLCSLQEVRQFSRLFVPIAYSLICVFGLLGNILVVITFAFYKKARSMTDVYLLNMAIADILFVLTPFWAVSHATGAWVFSNATCKLLKGIYAINFNCGMLLLTCISMDRYIAIVQATKSFRLRLPRSKIICLVVWGLSVIISSSTFVFNTQ-----GSDVCEPKYVSEPIRWKLLMLGLELLFGFFIPLMFMIFCYTFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNMVLLVTAANL-GKMNRSCQSEKLIGYTKTVTEVLAFLHCCLNPVLYAFIGQKFRNYFLKILKDLWC------------------------- | |||||||||||||
9 | 6lfmR | 0.87 | 0.71 | 20.03 | 1.81 | CNFpred | -------------------------------------NKYFVVIIYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRYLVKFICLSIWGLSLLLALPVLLFRRTVYSSNVSPACYEDMGNNTANWRMLLRILPQSFGFIVPLLIMLFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCERRNHIDRALDATEILGILHSCLNPLIYAFIGQKFRHGLLKILAIH--------------------------- | |||||||||||||
10 | 6d26A | 0.25 | 0.21 | 6.65 | 1.33 | DEthreader | -------------A-T--LKPLCLEQMSRLQSH-IRYIDHAAVLLHGLASLLGLVENGVILFVVGCRMR-QTVVTTWVLHLALSDLLASASLPFFTYFLAVGWELGTTFCKLHSSIFFLNMFASGFLLSAISLDRCLQVVRPVWAQNHRVAAAHKVCLVLWALAVLNTVPYFVFRDTISRLDGRIMCYYNVLDTCNSRQAALAVSKFLLAFLVPLAIIASSHAAVSLRLQHAGRRRPGRFVRLVAAVVAAFALCWGPYHVFSLLEARA-HANPG----LRPLVWRGLPFVTSLAFFNSVANPVLYVLT-PDMLRKLRRSLRTVLESVL---------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |