>P24347 (106 residues) VRFPVHAALVWGPEKNKIYFFRGRDYWRFHPSTRRVDSPVPRRATDWRGVPSEIDAAFQD ADGYAYFLRGRLYWKFDPVKVKALEGFPRLVGPDFFGCAEPANTFL |
Sequence |
20 40 60 80 100 | | | | | VRFPVHAALVWGPEKNKIYFFRGRDYWRFHPSTRRVDSPVPRRATDWRGVPSEIDAAFQDADGYAYFLRGRLYWKFDPVKVKALEGFPRLVGPDFFGCAEPANTFL |
Prediction | CCCCSSSSSSSSCCCCSSSSSSCCSSSSSSCCCCSCCCCCCSSCCCCCCCCCCCCSSSSSCCCCSSSSSCCSSSSSCCCCCSSCCCCCSSCCCCCCCCCCCCCCCC |
Confidence | 9997118999847999899997999999949987136999724543689999975899918993999989999999098433738976342246899898666679 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | VRFPVHAALVWGPEKNKIYFFRGRDYWRFHPSTRRVDSPVPRRATDWRGVPSEIDAAFQDADGYAYFLRGRLYWKFDPVKVKALEGFPRLVGPDFFGCAEPANTFL |
Prediction | 8745010001125754200001453002015665424552144155055136411000126743100034641040267535246423453464035147524336 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
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SS Seq | CCCCSSSSSSSSCCCCSSSSSSCCSSSSSSCCCCSCCCCCCSSCCCCCCCCCCCCSSSSSCCCCSSSSSCCSSSSSCCCCCSSCCCCCSSCCCCCCCCCCCCCCCC VRFPVHAALVWGPEKNKIYFFRGRDYWRFHPSTRRVDSPVPRRATDWRGVPSEIDAAFQDADGYAYFLRGRLYWKFDPVKVKALEGFPRLVGPDFFGCAEPANTFL | |||||||||||||||||||
1 | 3c7xA | 0.37 | 0.33 | 9.81 | 1.33 | DEthreader | LTDKIDAALFWMPN-GKTYFFRGNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEFTYFYKGNKYWKFNNQKLKVEPGYPKSALDWMG---------- | |||||||||||||
2 | 3ba0A3 | 0.28 | 0.24 | 7.21 | 2.18 | SPARKS-K | -----DAAVFNPRFY-RTYFFVDNQYWRYDERRQMMDPGYPKLITNFQGIGPKIDAVFYSKNKYYYFFQGSNQFEYDFLLQR---ITKTLKSNSWFGC-------- | |||||||||||||
3 | 3oyoA | 0.21 | 0.19 | 5.98 | 0.55 | MapAlign | --PYINAAFRSSS-EYEVYFFAKNKYVRLHYTSDTILT-NLRLISSGFSLFAGIDCSFHTEASEAYVFSGNHSAYIDYANDKIL-VGPTTIAEMFPVLN------- | |||||||||||||
4 | 3c7xA | 0.38 | 0.36 | 10.62 | 0.52 | CEthreader | PTDKIDAALFWMPNG-KTYFFRGNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPSG----- | |||||||||||||
5 | 3c7xA | 0.38 | 0.36 | 10.62 | 1.71 | MUSTER | LPDKIDAALFWMPN-GKTYFFRGNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPSG----- | |||||||||||||
6 | 1gxdA | 0.22 | 0.22 | 6.83 | 2.11 | HHsearch | LPEKIDAVYEAPQEE-KAVFFAGNEYWIYSA--STLERGYPKPLSGLPPDVQRVDAAFNWSNKKTYIFAGDKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVV | |||||||||||||
7 | 1itvA2 | 0.22 | 0.21 | 6.53 | 1.40 | FFAS-3D | -VAQVTGALR--SGRGKMLLFSGRRLWRFDVKAQMVDPRSASEVDRMFPGVPLDTHDVFQFREKAYFCQDRFYWRVSSRSELNQVDQVGYVTYDILQCPED----- | |||||||||||||
8 | 3c7xA | 0.38 | 0.36 | 10.62 | 0.82 | EigenThreader | PTDKIDAALFWMP-NGKTYFFRGNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPSG----- | |||||||||||||
9 | 2mqsA | 0.37 | 0.35 | 10.37 | 2.18 | CNFpred | PTDKIDAALFWMP-NGKTYFFRGNKYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSEVFTYFYKGNKYWKFNNQKLKVEPGYPKSALRDWMGCPSG----- | |||||||||||||
10 | 3lp9A | 0.15 | 0.14 | 4.76 | 1.33 | DEthreader | GSYGIDCSFDT--ENNEAFIFYENFCALIDYAKKDKIILGPKKIADFPFFFEGIDAAYRSTRGEVYLFKGDQYARIDYGSNSMVKEIKSIS-GYCFVYFFKDD--- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |