>P24347 (282 residues) MAPAAWLRSAAARALLPPMLLLLLQPPPLLARALPPDAHHLHAERRGPQPWHAALPSSPA PAPATQEAPRPASSLRPPRCGVPDPSDGLSARNRQKRFVLSGGRWEKTDLTYRILRFPWQ LVQEQVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHA FFPKTHREGDVHFDYDETWTIGDDQGTDLLQVAAHEFGHVLGLQHTTAAKALMSAFYTFR YPLSLSPDDCRGVQHLYGQPWPTVTSRTPALGPQAGIDTNEI |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | MAPAAWLRSAAARALLPPMLLLLLQPPPLLARALPPDAHHLHAERRGPQPWHAALPSSPAPAPATQEAPRPASSLRPPRCGVPDPSDGLSARNRQKRFVLSGGRWEKTDLTYRILRFPWQLVQEQVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQVAAHEFGHVLGLQHTTAAKALMSAFYTFRYPLSLSPDDCRGVQHLYGQPWPTVTSRTPALGPQAGIDTNEI |
Prediction | CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCSSSSSSSCCCCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCSSSSSSCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC |
Confidence | 997654444576533189999999808876334799853112778766689886676468763225467999997489999988887766555421123689888876146998437998999999999999999986037836999448998656775113677887646788657765247988787502465434567877652124568777634416888998774115502688899999999999999849799999998898999999998989 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | MAPAAWLRSAAARALLPPMLLLLLQPPPLLARALPPDAHHLHAERRGPQPWHAALPSSPAPAPATQEAPRPASSLRPPRCGVPDPSDGLSARNRQKRFVLSGGRWEKTDLTYRILRFPWQLVQEQVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQVAAHEFGHVLGLQHTTAAKALMSAFYTFRYPLSLSPDDCRGVQHLYGQPWPTVTSRTPALGPQAGIDTNEI |
Prediction | 743342244233424346023103422313453364644434543454352353044244225313425502530542100021346444444442221244440443302220232245044630240034003202431302022045451302022132332122212332220012123343230321023222302324322101200012001000031363320000010344451503411030012031434634557435353645244765 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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SS Seq | CCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCSSSCCCCCCCCCCSSSSSSSCCCCCCCHHHHHHHHHHHHHHHHHCCCCSSSSSCCCCCCSSSSSSCCCCCCCCCCCCCCCSSSSSSCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC MAPAAWLRSAAARALLPPMLLLLLQPPPLLARALPPDAHHLHAERRGPQPWHAALPSSPAPAPATQEAPRPASSLRPPRCGVPDPSDGLSARNRQKRFVLSGGRWEKTDLTYRILRFPWQLVQEQVRQTMAEALKVWSDVTPLTFTEVHEGRADIMIDFARYWHGDDLPFDGPGGILAHAFFPKTHREGDVHFDYDETWTIGDDQGTDLLQVAAHEFGHVLGLQHTTAAKALMSAFYTFRYPLSLSPDDCRGVQHLYGQPWPTVTSRTPALGPQAGIDTNEI | |||||||||||||||||||
1 | 1gxdA | 0.40 | 0.30 | 8.89 | 1.00 | DEthreader | ----------P-GDV-APK-DELAVQYL---------NL-FV-------LK--DT--KM-----DLDQN-TIETMRKRCGNPDVA-Y-----------FPRKPKWDKNQITYRIIGYTPDLDPETVDDAFARAFQVWSDVTPLRFSRIHDGEADIMINFGRWEHGDGYPFDGKDGLLAHAFAPGTGVGGDSHFDDDELWTLGEGQGYSLFLVAAHAFGHAMGLEHSQDPGALMAPIYTYTKNFRLSQDDIKGIQELYGASPDT------------------- | |||||||||||||
2 | 1l6jA2 | 0.38 | 0.31 | 9.15 | 3.27 | SPARKS-K | ------------------VLFPGDLRTNLTDRQLAEEYLYRYGYT--LGPALLLLQKQLSLPETGELDSATLKAMRTPRCGVPDLGRFQT--------FEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHFDDDELWSLVVDQGYSLFLVAAHEFGHALGLDHSSVPEALMYPMYRFTEGPPLHKDDVNGIRHLYG------------------------ | |||||||||||||
3 | 1su3B | 0.38 | 0.31 | 9.24 | 1.03 | MapAlign | -------------VDLVQKYLEKYYNLKSGPVVEKLKQMQE----------------FFGLKVTGKPDAETLKVMKQPRC----------------GVPDVAPRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF-REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDS----- | |||||||||||||
4 | 1su3B | 0.39 | 0.32 | 9.54 | 0.79 | CEthreader | -------------------------------VDLVQKYLEKYYNLKSGPEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDV----------------APRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNN-FREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDSKLTFD | |||||||||||||
5 | 1su3B | 0.39 | 0.33 | 9.64 | 2.15 | MUSTER | ---------------VDLVQKYLEKYYNLKSG--------------PVVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVA----------------PRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFR-EYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDSKLT-F | |||||||||||||
6 | 1l6jA | 0.38 | 0.30 | 9.03 | 3.79 | HHsearch | ------------------------VLFPGDDRQLAEEYLYRYGYT--LGPALLLLQKQLSLPETGELDSATLKAMRTPRCGVPDLGRF--------QTFEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHFDDDELWSLGKGQGYSLFLVAAHEFGHALGLDHSSVPEALMYPMYRFTEGPPLHKDDVNGIRHLYG------------------------ | |||||||||||||
7 | 1slmA | 0.43 | 0.34 | 9.88 | 2.17 | FFAS-3D | --------------VQKYLENYYDLK---------KDSGPVVKKIREMQKFL-GLEVTGKLD------SDTLEVMRKPRCGVPDV--------GHFRTFPGIPKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQWT-KDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDFRLSQDDINGIQSLYGPP---------------------- | |||||||||||||
8 | 1su3B | 0.36 | 0.30 | 8.87 | 1.33 | EigenThreader | -------------------------------VDLVQKYLEKYYNLKSGVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPD---------------VAPRWEQTHLT-YRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERW-TNNFREYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQPIGPQTPKACDSKLTFD | |||||||||||||
9 | 1su3A | 0.41 | 0.33 | 9.60 | 3.04 | CNFpred | ---------------------------------LVQKYLEKYYNLK-VVEKLKQMQEFFGLKVTGKPDAETLKVMKQPRCGVPDVA----------------PRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNF-REYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNPVQP--------IGPQTPKA | |||||||||||||
10 | 1su3B | 0.42 | 0.29 | 8.55 | 1.00 | DEthreader | ------------------DLVQKYL-K----------S---G-----------PVVEKL------KPDAETLKVMKQRCGVPDV---------A--------PRWEQTHLTYRIENYTPDLPRADVDHAIEKAFQLWSNVTPLTFTKVSEGQADIMISFVRGDHRDNSPFDGPGGNLAHAFQPGPGIGGDAHFDEDERWTNNFR-EYNLHRVAAHELGHSLGLSHSTDIGALMYPSYTFSGDVQLAQDDIDGIQAIYGRSQNP------------------- | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |