Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| SS Seq | CSSSCCCCCSSSCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHSSSSCCSSSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQL |
1 | 7r1rA | 0.23 | 0.22 | 6.85 | 1.33 | DEthreader | | LLVTKRGSTERINL-DKIHRVLDWAAEGLH--NVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRAPDYQYLAARLAIFHLRKKAYPPLYDHVVKMVEM---------GKYDNHLLEDYTEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNTGEIYESAQFLYILVAACLFSNRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRFL |
2 | 7r1rA | 0.25 | 0.24 | 7.35 | 2.14 | SPARKS-K | | LLVTKRDGSTERINLDKIHRVLDWAAEGLHN--VSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRAPDYQYLAARLAIFHLRKKAYGALYDHVVKMVEM---------GKYDNHLLEDYEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRGEIYESAQFLYILVAACLFSNYLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQF |
3 | 7r1rA | 0.25 | 0.24 | 7.35 | 1.68 | MapAlign | | LLVTKRDGSTERINLDKIHRVLDWAAEGLH--NVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISDAPDYQYLAARLAIFHLRKKAPPALYDHVVKMVEM---------GKYDNHLLEDYEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNTGEIYESAQFLYILVAACLFSTRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQF |
4 | 7r1rA | 0.25 | 0.25 | 7.63 | 1.30 | CEthreader | | LLVTKRDGSTERINLDKIHRVLDWAAEGLH--NVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGK---YDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRGEIYESAQFLYILVAACLFSNYLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQF |
5 | 2wghB1 | 1.00 | 0.64 | 17.97 | 1.61 | MUSTER | | -----------------------------------------------------------------------------AARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQL |
6 | 5im3A | 0.33 | 0.32 | 9.64 | 3.51 | HHsearch | | IRITRADGSLSPLDMGRLNTIISEACEGLAE--VDGALIERETLKNLYDGVAEKDVNTALVMTARTLVEREPNYSYVTARLLMDTLRAEALGFLGVAMAELYAKAYIEKGAEFELVDAKLKEF---DLEKLGKAIDHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQIFFMRVAMGLAIEEEARAIEFYNLLSSFDYMSSTPTLFNAGTLRPQL |
7 | 6lkmA1 | 1.00 | 0.65 | 18.10 | 2.02 | FFAS-3D | | ----------------------------------------------------------------------------LAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQL |
8 | 5im3A | 0.29 | 0.28 | 8.49 | 1.52 | EigenThreader | | IRITRADGSLSPLDMGRLNTIISEACEGLAEV--DGALIERETLKNLYDGVAEKDVNTALVMTARTSYVT----ARLLMDTLRAEALGFLGVAEMAELYAKALPAYIEKGAEFELVDAKLKEFD---LEKLGKAIDHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQIFFMRVAMGLAIEREARAIEFYNLLSSFDYMSSTPTLFNAGTLRPQL |
9 | 5d1yA | 1.00 | 0.94 | 26.31 | 1.86 | CNFpred | | -------------MFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQL |
10 | 5im3A | 0.33 | 0.31 | 9.22 | 1.33 | DEthreader | | IRITRADGSLSPLDMGRLNTIISEACEGLA--EVDGALIERETLKNLYDGVAEKDVNTALVMTARTLVEREPNYSYVTARLLMDTLRAEALVALPAYIEKGAEF---------ELVD---AKLKEFDLEKLGKAIDHERDQQFTYLGLQTLYDRYFIHKDGIRFELPQIFFMRVAMGLAIEREARAIEFYNLLSSFDYMSSTPTLFNAGTLRPQL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Download alignment lists the threading program used to identify the template, and provide the 3D structure of aligned regions of threading templates (threading[1-10].pdb.gz). |
(f) | Template residues identical to query sequence are highlighted in color. |
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