>P23560 (110 residues) LSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCR GIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKRGR |
Sequence |
20 40 60 80 100 | | | | | LSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKRGR |
Prediction | CCCCCCSSSSSSCCCCCSSSSCCCCSSSSSSSSSCCCCCSSSSSSSSSSCCCCCCCCCCCCCSCCCCSSSSCCCCSSSSSSSSCCCCSSSSSSSSSCCSSSSSSSSCCCC |
Confidence | 95345501688636774246279978999878863997178999996406999889998755165513452154105666685489736789999766279999841489 |
H:Helix; S:Strand; C:Coil | |
Sequence |
20 40 60 80 100 | | | | | LSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKRGR |
Prediction | 74314343421446444414435444141245153774312110232414547457431213164314141454442030113456542213203041201010345668 |
Values range from 0 (buried residue) to 8 (highly exposed residue) | |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Downloadalignment | 20 40 60 80 100 | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SS Seq | CCCCCCSSSSSSCCCCCSSSSCCCCSSSSSSSSSCCCCCSSSSSSSSSSCCCCCCCCCCCCCSCCCCSSSSCCCCSSSSSSSSCCCCSSSSSSSSSCCSSSSSSSSCCCC LSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIKRGR | |||||||||||||||||||
1 | 4ec7A | 0.47 | 0.39 | 11.39 | 1.00 | DEthreader | EHSCDSVSAWVT---KTTATDIKGNTVTVMENVNLDNKVYKEYFFETKCNPNPEPSGCR-------GIDSCTETDTFIKALTME-GNQASWRFIRIETACVCV------- | |||||||||||||
2 | 4ec7A | 0.53 | 0.51 | 14.71 | 2.77 | SPARKS-K | HSVCDSVSAWVT---KTTATDIKGNTVTVMENVNLDNKVYKEYFFETKCKNPNPEPSGCRGIDSSHWNSYCTETDTFIKALTMEGN-QASWRFIRIETACVCVITKKKGN | |||||||||||||
3 | 1bndA | 1.00 | 0.97 | 27.24 | 1.24 | MapAlign | LSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIK--- | |||||||||||||
4 | 1bndA | 1.00 | 0.97 | 27.24 | 1.43 | CEthreader | LSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIK--- | |||||||||||||
5 | 1bndA | 1.00 | 0.97 | 27.24 | 2.98 | MUSTER | LSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIK--- | |||||||||||||
6 | 4ec7A | 0.53 | 0.51 | 14.71 | 4.13 | HHsearch | HSVCDSVSAWVT---KTTATDIKGNTVTVMENVNLDNKVYKEYFFETKCKNPNPEPSGCRGIDSSHWNSYCTETDTFIKALTMEG-NQASWRFIRIETACVCVITKKKGN | |||||||||||||
7 | 1bndA | 1.00 | 0.97 | 27.24 | 1.98 | FFAS-3D | LSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIK--- | |||||||||||||
8 | 1bndA | 1.00 | 0.97 | 27.24 | 1.08 | EigenThreader | LSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIK--- | |||||||||||||
9 | 1b8mA | 1.00 | 0.97 | 27.24 | 2.81 | CNFpred | LSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTLTIK--- | |||||||||||||
10 | 1bndA | 0.95 | 0.85 | 23.97 | 1.00 | DEthreader | LSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNP----KEGCR-GIDKRWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCVCTL------ | |||||||||||||
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Top 10 structural analogs in PDB (as identified by
TM-align)
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Top 5 enzyme homologs in PDB
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Template proteins with similar binding site:
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References: | |
1. | Wei Zheng, Chengxin Zhang, Yang Li, Robin Pearce, Eric W. Bell, Yang Zhang. Folding non-homology proteins by coupling deep-learning contact maps with I-TASSER assembly simulations. In preparation, 2020. |